Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
SPG11Q96JI7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPG11Q96JI7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SPG11Q96JI7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SPG11Q96JI7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.09■□□□□ 0.65
SPG11Q96JI7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPG11Q96JI7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPG11Q96JI7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPG11Q96JI7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPG11Q96JI7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPG11Q96JI7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPG11Q96JI7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SPG11Q96JI7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.09■□□□□ 0.65
SPG11Q96JI7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.09■□□□□ 0.65
SPG11Q96JI7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SPG11Q96JI7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SPG11Q96JI7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.09■□□□□ 0.65
SPG11Q96JI7 TPRG1LP1-201ENST00000598702 760 ntBASIC19.09■□□□□ 0.65
SPG11Q96JI7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SPG11Q96JI7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SPG11Q96JI7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.08■□□□□ 0.65
SPG11Q96JI7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
SPG11Q96JI7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SPG11Q96JI7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SPG11Q96JI7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SPG11Q96JI7 AL355802.2-201ENST00000402069 882 ntBASIC19.08■□□□□ 0.64
SPG11Q96JI7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.08■□□□□ 0.64
SPG11Q96JI7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.08■□□□□ 0.64
SPG11Q96JI7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SPG11Q96JI7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.08■□□□□ 0.64
SPG11Q96JI7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SPG11Q96JI7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SPG11Q96JI7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.08■□□□□ 0.64
SPG11Q96JI7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SPG11Q96JI7 AC006970.2-201ENST00000450065 779 ntBASIC19.08■□□□□ 0.64
SPG11Q96JI7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.08■□□□□ 0.64
SPG11Q96JI7 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.08■□□□□ 0.64
SPG11Q96JI7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SPG11Q96JI7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPG11Q96JI7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPG11Q96JI7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPG11Q96JI7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPG11Q96JI7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPG11Q96JI7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SPG11Q96JI7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPG11Q96JI7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SPG11Q96JI7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.07■□□□□ 0.64
SPG11Q96JI7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.07■□□□□ 0.64
SPG11Q96JI7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SPG11Q96JI7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPG11Q96JI7 MIR663A-201ENST00000385250 93 ntBASIC19.06■□□□□ 0.64
SPG11Q96JI7 GPX1P1-201ENST00000388829 606 ntBASIC19.06■□□□□ 0.64
SPG11Q96JI7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPG11Q96JI7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.06■□□□□ 0.64
SPG11Q96JI7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SPG11Q96JI7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SPG11Q96JI7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.06■□□□□ 0.64
SPG11Q96JI7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.06■□□□□ 0.64
SPG11Q96JI7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SPG11Q96JI7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPG11Q96JI7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPG11Q96JI7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPG11Q96JI7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.05■□□□□ 0.64
SPG11Q96JI7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.05■□□□□ 0.64
SPG11Q96JI7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.05■□□□□ 0.64
SPG11Q96JI7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
SPG11Q96JI7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.05■□□□□ 0.64
SPG11Q96JI7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.05■□□□□ 0.64
SPG11Q96JI7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPG11Q96JI7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.05■□□□□ 0.64
SPG11Q96JI7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPG11Q96JI7 AL109923.1-201ENST00000618799 583 ntBASIC19.05■□□□□ 0.64
SPG11Q96JI7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.05■□□□□ 0.64
SPG11Q96JI7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPG11Q96JI7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SPG11Q96JI7 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.04■□□□□ 0.64
SPG11Q96JI7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPG11Q96JI7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.04■□□□□ 0.64
SPG11Q96JI7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPG11Q96JI7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.04■□□□□ 0.64
SPG11Q96JI7 KRT19P1-201ENST00000405746 1186 ntBASIC19.04■□□□□ 0.64
SPG11Q96JI7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SPG11Q96JI7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.04■□□□□ 0.64
SPG11Q96JI7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPG11Q96JI7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.03■□□□□ 0.64
SPG11Q96JI7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.03■□□□□ 0.64
SPG11Q96JI7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.03■□□□□ 0.64
SPG11Q96JI7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.03■□□□□ 0.64
SPG11Q96JI7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPG11Q96JI7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SPG11Q96JI7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPG11Q96JI7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPG11Q96JI7 LINC02228-203ENST00000641970 1355 ntBASIC19.03■□□□□ 0.64
SPG11Q96JI7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPG11Q96JI7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.03■□□□□ 0.64
SPG11Q96JI7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPG11Q96JI7 CD99P1-205ENST00000527459 561 ntBASIC19.03■□□□□ 0.64
SPG11Q96JI7 BID-214ENST00000617586 542 ntTSL 5 BASIC19.03■□□□□ 0.64
SPG11Q96JI7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPG11Q96JI7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms