Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
PDLIM5Q96HC4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
PDLIM5Q96HC4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM5Q96HC4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PDLIM5Q96HC4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM5Q96HC4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDLIM5Q96HC4 ESRRAP2-201ENST00000418437 1549 ntBASIC21.86■■□□□ 1.09
PDLIM5Q96HC4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM5Q96HC4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.86■■□□□ 1.09
PDLIM5Q96HC4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PDLIM5Q96HC4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
PDLIM5Q96HC4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM5Q96HC4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.86■■□□□ 1.09
PDLIM5Q96HC4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM5Q96HC4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.86■■□□□ 1.09
PDLIM5Q96HC4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PDLIM5Q96HC4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.86■■□□□ 1.09
PDLIM5Q96HC4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM5Q96HC4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PDLIM5Q96HC4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDLIM5Q96HC4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM5Q96HC4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM5Q96HC4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.85■■□□□ 1.09
PDLIM5Q96HC4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM5Q96HC4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PDLIM5Q96HC4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PDLIM5Q96HC4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PDLIM5Q96HC4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDLIM5Q96HC4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDLIM5Q96HC4 AC233723.2-201ENST00000623798 2106 ntBASIC21.84■■□□□ 1.09
PDLIM5Q96HC4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.84■■□□□ 1.09
PDLIM5Q96HC4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDLIM5Q96HC4 C17orf82-201ENST00000623772 1530 ntBASIC21.84■■□□□ 1.09
PDLIM5Q96HC4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PDLIM5Q96HC4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM5Q96HC4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM5Q96HC4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM5Q96HC4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM5Q96HC4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM5Q96HC4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM5Q96HC4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM5Q96HC4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
PDLIM5Q96HC4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.83■■□□□ 1.09
PDLIM5Q96HC4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDLIM5Q96HC4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.83■■□□□ 1.09
PDLIM5Q96HC4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.83■■□□□ 1.08
PDLIM5Q96HC4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM5Q96HC4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
PDLIM5Q96HC4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM5Q96HC4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM5Q96HC4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM5Q96HC4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.82■■□□□ 1.08
PDLIM5Q96HC4 GUSBP5-201ENST00000418136 578 ntBASIC21.82■■□□□ 1.08
PDLIM5Q96HC4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.82■■□□□ 1.08
PDLIM5Q96HC4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PDLIM5Q96HC4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM5Q96HC4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PDLIM5Q96HC4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM5Q96HC4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM5Q96HC4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDLIM5Q96HC4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.81■■□□□ 1.08
PDLIM5Q96HC4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.81■■□□□ 1.08
PDLIM5Q96HC4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM5Q96HC4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PDLIM5Q96HC4 AL117328.2-201ENST00000624617 1940 ntBASIC21.81■■□□□ 1.08
PDLIM5Q96HC4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.81■■□□□ 1.08
PDLIM5Q96HC4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDLIM5Q96HC4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDLIM5Q96HC4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM5Q96HC4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM5Q96HC4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM5Q96HC4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM5Q96HC4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.79■■□□□ 1.08
PDLIM5Q96HC4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PDLIM5Q96HC4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PDLIM5Q96HC4 KRT16P3-201ENST00000439127 1283 ntBASIC21.79■■□□□ 1.08
PDLIM5Q96HC4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.79■■□□□ 1.08
PDLIM5Q96HC4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.79■■□□□ 1.08
PDLIM5Q96HC4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.79■■□□□ 1.08
PDLIM5Q96HC4 AC009086.3-201ENST00000623486 1008 ntBASIC21.79■■□□□ 1.08
PDLIM5Q96HC4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PDLIM5Q96HC4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM5Q96HC4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM5Q96HC4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM5Q96HC4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PDLIM5Q96HC4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms