Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDF1Q96CC6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
RHBDF1Q96CC6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.74■■□□□ 1.07
RHBDF1Q96CC6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDF1Q96CC6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDF1Q96CC6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.74■■□□□ 1.07
RHBDF1Q96CC6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.74■■□□□ 1.07
RHBDF1Q96CC6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
RHBDF1Q96CC6 FP325331.1-202ENST00000623531 1380 ntBASIC21.74■■□□□ 1.07
RHBDF1Q96CC6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
RHBDF1Q96CC6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RHBDF1Q96CC6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RHBDF1Q96CC6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RHBDF1Q96CC6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.73■■□□□ 1.07
RHBDF1Q96CC6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
RHBDF1Q96CC6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RHBDF1Q96CC6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RHBDF1Q96CC6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
RHBDF1Q96CC6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
RHBDF1Q96CC6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 LINC01529-204ENST00000636474 1715 ntBASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 MIR6724-1-201ENST00000616420 92 ntBASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 MIR6724-2-201ENST00000616483 92 ntBASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 MIR6724-4-201ENST00000617390 92 ntBASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 MIR6724-3-201ENST00000622482 92 ntBASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RHBDF1Q96CC6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RHBDF1Q96CC6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RHBDF1Q96CC6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.71■■□□□ 1.07
RHBDF1Q96CC6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RHBDF1Q96CC6 GUSBP5-201ENST00000418136 578 ntBASIC21.71■■□□□ 1.07
RHBDF1Q96CC6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.71■■□□□ 1.07
RHBDF1Q96CC6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.71■■□□□ 1.07
RHBDF1Q96CC6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RHBDF1Q96CC6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
RHBDF1Q96CC6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RHBDF1Q96CC6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RHBDF1Q96CC6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RHBDF1Q96CC6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RHBDF1Q96CC6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RHBDF1Q96CC6 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RHBDF1Q96CC6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RHBDF1Q96CC6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
RHBDF1Q96CC6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RHBDF1Q96CC6 AC233723.2-201ENST00000623798 2106 ntBASIC21.7■■□□□ 1.06
RHBDF1Q96CC6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.69■■□□□ 1.06
RHBDF1Q96CC6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RHBDF1Q96CC6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.69■■□□□ 1.06
RHBDF1Q96CC6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.69■■□□□ 1.06
RHBDF1Q96CC6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.69■■□□□ 1.06
RHBDF1Q96CC6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RHBDF1Q96CC6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RHBDF1Q96CC6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RHBDF1Q96CC6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RHBDF1Q96CC6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RHBDF1Q96CC6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RHBDF1Q96CC6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RHBDF1Q96CC6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.68■■□□□ 1.06
RHBDF1Q96CC6 KRT16P3-201ENST00000439127 1283 ntBASIC21.68■■□□□ 1.06
RHBDF1Q96CC6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.68■■□□□ 1.06
RHBDF1Q96CC6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RHBDF1Q96CC6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RHBDF1Q96CC6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RHBDF1Q96CC6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RHBDF1Q96CC6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RHBDF1Q96CC6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RHBDF1Q96CC6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RHBDF1Q96CC6 C17orf82-201ENST00000623772 1530 ntBASIC21.67■■□□□ 1.06
RHBDF1Q96CC6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
RHBDF1Q96CC6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
RHBDF1Q96CC6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RHBDF1Q96CC6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.67■■□□□ 1.06
RHBDF1Q96CC6 DUX4L4-201ENST00000566884 1269 ntBASIC21.67■■□□□ 1.06
RHBDF1Q96CC6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RHBDF1Q96CC6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RHBDF1Q96CC6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.67■■□□□ 1.06
RHBDF1Q96CC6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RHBDF1Q96CC6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RHBDF1Q96CC6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RHBDF1Q96CC6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RHBDF1Q96CC6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RHBDF1Q96CC6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.66■■□□□ 1.06
RHBDF1Q96CC6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.66■■□□□ 1.06
RHBDF1Q96CC6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.66■■□□□ 1.06
RHBDF1Q96CC6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RHBDF1Q96CC6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RHBDF1Q96CC6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RHBDF1Q96CC6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms