Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF4Q92544 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF4Q92544 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF4Q92544 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF4Q92544 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.97■□□□□ 0.95
TM9SF4Q92544 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.97■□□□□ 0.95
TM9SF4Q92544 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TM9SF4Q92544 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF4Q92544 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF4Q92544 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.96■□□□□ 0.95
TM9SF4Q92544 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.96■□□□□ 0.95
TM9SF4Q92544 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
TM9SF4Q92544 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
TM9SF4Q92544 AL161729.1-201ENST00000604104 1402 ntBASIC20.96■□□□□ 0.95
TM9SF4Q92544 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TM9SF4Q92544 ABCB10P4-201ENST00000566803 2184 ntBASIC20.96■□□□□ 0.95
TM9SF4Q92544 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TM9SF4Q92544 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM9SF4Q92544 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.96■□□□□ 0.95
TM9SF4Q92544 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.96■□□□□ 0.95
TM9SF4Q92544 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TM9SF4Q92544 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.96■□□□□ 0.95
TM9SF4Q92544 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TM9SF4Q92544 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
TM9SF4Q92544 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.95■□□□□ 0.94
TM9SF4Q92544 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.95■□□□□ 0.94
TM9SF4Q92544 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM9SF4Q92544 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM9SF4Q92544 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TM9SF4Q92544 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM9SF4Q92544 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TM9SF4Q92544 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.95■□□□□ 0.94
TM9SF4Q92544 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.94■□□□□ 0.94
TM9SF4Q92544 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.94■□□□□ 0.94
TM9SF4Q92544 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.94■□□□□ 0.94
TM9SF4Q92544 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TM9SF4Q92544 C9orf163-202ENST00000624034 2573 ntBASIC20.94■□□□□ 0.94
TM9SF4Q92544 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM9SF4Q92544 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
TM9SF4Q92544 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TM9SF4Q92544 C17orf82-201ENST00000623772 1530 ntBASIC20.94■□□□□ 0.94
TM9SF4Q92544 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM9SF4Q92544 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.93■□□□□ 0.94
TM9SF4Q92544 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.93■□□□□ 0.94
TM9SF4Q92544 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.93■□□□□ 0.94
TM9SF4Q92544 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.93■□□□□ 0.94
TM9SF4Q92544 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM9SF4Q92544 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.93■□□□□ 0.94
TM9SF4Q92544 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM9SF4Q92544 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TM9SF4Q92544 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TM9SF4Q92544 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM9SF4Q92544 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
TM9SF4Q92544 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM9SF4Q92544 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM9SF4Q92544 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.92■□□□□ 0.94
TM9SF4Q92544 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.92■□□□□ 0.94
TM9SF4Q92544 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.92■□□□□ 0.94
TM9SF4Q92544 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.92■□□□□ 0.94
TM9SF4Q92544 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.92■□□□□ 0.94
TM9SF4Q92544 AC008764.7-201ENST00000593779 1081 ntBASIC20.92■□□□□ 0.94
TM9SF4Q92544 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.92■□□□□ 0.94
TM9SF4Q92544 MIR6821-201ENST00000617625 74 ntBASIC20.92■□□□□ 0.94
TM9SF4Q92544 AC136469.2-201ENST00000623944 1028 ntBASIC20.92■□□□□ 0.94
TM9SF4Q92544 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.92■□□□□ 0.94
TM9SF4Q92544 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM9SF4Q92544 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM9SF4Q92544 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM9SF4Q92544 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TM9SF4Q92544 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TM9SF4Q92544 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TM9SF4Q92544 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM9SF4Q92544 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM9SF4Q92544 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM9SF4Q92544 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TM9SF4Q92544 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TM9SF4Q92544 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.91■□□□□ 0.94
TM9SF4Q92544 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM9SF4Q92544 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.91■□□□□ 0.94
TM9SF4Q92544 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.91■□□□□ 0.94
TM9SF4Q92544 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TM9SF4Q92544 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM9SF4Q92544 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM9SF4Q92544 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM9SF4Q92544 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TM9SF4Q92544 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
TM9SF4Q92544 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM9SF4Q92544 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM9SF4Q92544 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TM9SF4Q92544 AC097381.1-201ENST00000429019 1296 ntBASIC20.9■□□□□ 0.94
TM9SF4Q92544 AC009086.3-201ENST00000623486 1008 ntBASIC20.9■□□□□ 0.94
TM9SF4Q92544 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TM9SF4Q92544 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TM9SF4Q92544 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TM9SF4Q92544 IRS3P-201ENST00000223076 1006 ntBASIC20.89■□□□□ 0.93
TM9SF4Q92544 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TM9SF4Q92544 AC099791.1-201ENST00000416440 715 ntBASIC20.89■□□□□ 0.93
TM9SF4Q92544 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.89■□□□□ 0.93
TM9SF4Q92544 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TM9SF4Q92544 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms