Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTN4IP1Q8WWV3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4IP1Q8WWV3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4IP1Q8WWV3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTN4IP1Q8WWV3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
RTN4IP1Q8WWV3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.58
RTN4IP1Q8WWV3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.7■□□□□ 0.58
RTN4IP1Q8WWV3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.7■□□□□ 0.58
RTN4IP1Q8WWV3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4IP1Q8WWV3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.7■□□□□ 0.58
RTN4IP1Q8WWV3 AL031848.2-201ENST00000607670 837 ntBASIC18.7■□□□□ 0.58
RTN4IP1Q8WWV3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4IP1Q8WWV3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.7■□□□□ 0.58
RTN4IP1Q8WWV3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4IP1Q8WWV3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RTN4IP1Q8WWV3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RTN4IP1Q8WWV3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RTN4IP1Q8WWV3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 AF131216.4-201ENST00000638924 1588 ntBASIC18.68■□□□□ 0.58
RTN4IP1Q8WWV3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4IP1Q8WWV3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4IP1Q8WWV3 AC242852.2-201ENST00000615738 1807 ntBASIC18.67■□□□□ 0.58
RTN4IP1Q8WWV3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4IP1Q8WWV3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.67■□□□□ 0.58
RTN4IP1Q8WWV3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4IP1Q8WWV3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4IP1Q8WWV3 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4IP1Q8WWV3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4IP1Q8WWV3 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RTN4IP1Q8WWV3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4IP1Q8WWV3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4IP1Q8WWV3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4IP1Q8WWV3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.67■□□□□ 0.58
RTN4IP1Q8WWV3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.66■□□□□ 0.58
RTN4IP1Q8WWV3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4IP1Q8WWV3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.66■□□□□ 0.58
RTN4IP1Q8WWV3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4IP1Q8WWV3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4IP1Q8WWV3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4IP1Q8WWV3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RTN4IP1Q8WWV3 ESRRAP2-201ENST00000418437 1549 ntBASIC18.65■□□□□ 0.58
RTN4IP1Q8WWV3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RTN4IP1Q8WWV3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4IP1Q8WWV3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4IP1Q8WWV3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4IP1Q8WWV3 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.65■□□□□ 0.58
RTN4IP1Q8WWV3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.65■□□□□ 0.58
RTN4IP1Q8WWV3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
RTN4IP1Q8WWV3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4IP1Q8WWV3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4IP1Q8WWV3 ALDH1A3-203ENST00000557963 1670 ntBASIC18.65■□□□□ 0.58
RTN4IP1Q8WWV3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RTN4IP1Q8WWV3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.64■□□□□ 0.57
RTN4IP1Q8WWV3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.64■□□□□ 0.57
RTN4IP1Q8WWV3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.64■□□□□ 0.57
RTN4IP1Q8WWV3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RTN4IP1Q8WWV3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4IP1Q8WWV3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.64■□□□□ 0.57
RTN4IP1Q8WWV3 RARRES2P1-201ENST00000474487 481 ntBASIC18.64■□□□□ 0.57
RTN4IP1Q8WWV3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4IP1Q8WWV3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RTN4IP1Q8WWV3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms