Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 AL499627.2-201ENST00000606283 725 ntBASIC26.41■■□□□ 1.82
STAG1Q8WVM7 AL138724.1-201ENST00000606771 1088 ntBASIC26.41■■□□□ 1.82
STAG1Q8WVM7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
STAG1Q8WVM7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
STAG1Q8WVM7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
STAG1Q8WVM7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.41■■□□□ 1.82
STAG1Q8WVM7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.4■■□□□ 1.82
STAG1Q8WVM7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
STAG1Q8WVM7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
STAG1Q8WVM7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
STAG1Q8WVM7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
STAG1Q8WVM7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
STAG1Q8WVM7 pRNA.6-201ENST00000610482 90 ntBASIC26.4■■□□□ 1.82
STAG1Q8WVM7 pRNA.5-201ENST00000612139 90 ntBASIC26.4■■□□□ 1.82
STAG1Q8WVM7 pRNA.11-201ENST00000618423 90 ntBASIC26.4■■□□□ 1.82
STAG1Q8WVM7 pRNA.13-201ENST00000619112 90 ntBASIC26.4■■□□□ 1.82
STAG1Q8WVM7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
STAG1Q8WVM7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.39■■□□□ 1.82
STAG1Q8WVM7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
STAG1Q8WVM7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.39■■□□□ 1.82
STAG1Q8WVM7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
STAG1Q8WVM7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
STAG1Q8WVM7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.39■■□□□ 1.81
STAG1Q8WVM7 AC135279.3-201ENST00000610945 1311 ntBASIC26.39■■□□□ 1.81
STAG1Q8WVM7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
STAG1Q8WVM7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.38■■□□□ 1.81
STAG1Q8WVM7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
STAG1Q8WVM7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
STAG1Q8WVM7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
STAG1Q8WVM7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC26.38■■□□□ 1.81
STAG1Q8WVM7 AC024257.2-201ENST00000549699 147 ntBASIC26.38■■□□□ 1.81
STAG1Q8WVM7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC26.38■■□□□ 1.81
STAG1Q8WVM7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.38■■□□□ 1.81
STAG1Q8WVM7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
STAG1Q8WVM7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
STAG1Q8WVM7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
STAG1Q8WVM7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
STAG1Q8WVM7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
STAG1Q8WVM7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.37■■□□□ 1.81
STAG1Q8WVM7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
STAG1Q8WVM7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
STAG1Q8WVM7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.37■■□□□ 1.81
STAG1Q8WVM7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.37■■□□□ 1.81
STAG1Q8WVM7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.37■■□□□ 1.81
STAG1Q8WVM7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
STAG1Q8WVM7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
STAG1Q8WVM7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
STAG1Q8WVM7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
STAG1Q8WVM7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
STAG1Q8WVM7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.36■■□□□ 1.81
STAG1Q8WVM7 DUSP8P3-201ENST00000399571 1760 ntBASIC26.36■■□□□ 1.81
STAG1Q8WVM7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.36■■□□□ 1.81
STAG1Q8WVM7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
STAG1Q8WVM7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.36■■□□□ 1.81
STAG1Q8WVM7 AC011298.3-201ENST00000615796 283 ntBASIC26.36■■□□□ 1.81
STAG1Q8WVM7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
STAG1Q8WVM7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
STAG1Q8WVM7 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.36■■□□□ 1.81
STAG1Q8WVM7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
STAG1Q8WVM7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
STAG1Q8WVM7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
STAG1Q8WVM7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.35■■□□□ 1.81
STAG1Q8WVM7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.35■■□□□ 1.81
STAG1Q8WVM7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.35■■□□□ 1.81
STAG1Q8WVM7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.35■■□□□ 1.81
STAG1Q8WVM7 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.35■■□□□ 1.81
STAG1Q8WVM7 AL031432.3-201ENST00000607698 485 ntBASIC26.35■■□□□ 1.81
STAG1Q8WVM7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
STAG1Q8WVM7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
STAG1Q8WVM7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
STAG1Q8WVM7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
STAG1Q8WVM7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
STAG1Q8WVM7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.33■■□□□ 1.81
STAG1Q8WVM7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.33■■□□□ 1.81
STAG1Q8WVM7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.33■■□□□ 1.81
STAG1Q8WVM7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
STAG1Q8WVM7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
STAG1Q8WVM7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
STAG1Q8WVM7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
STAG1Q8WVM7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
STAG1Q8WVM7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
STAG1Q8WVM7 SUDS3P1-201ENST00000505831 966 ntBASIC26.32■■□□□ 1.8
STAG1Q8WVM7 AC136469.2-201ENST00000623944 1028 ntBASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms