Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SNED1Q8TER0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
SNED1Q8TER0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SNED1Q8TER0 NT5C3AP1-201ENST00000394500 1012 ntBASIC27.54■■■□□ 2
SNED1Q8TER0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC27.54■■■□□ 2
SNED1Q8TER0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC27.54■■■□□ 2
SNED1Q8TER0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
SNED1Q8TER0 TPRG1LP1-201ENST00000598702 760 ntBASIC27.54■■■□□ 2
SNED1Q8TER0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.54■■■□□ 2
SNED1Q8TER0 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
SNED1Q8TER0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC27.54■■■□□ 2
SNED1Q8TER0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC27.53■■■□□ 2
SNED1Q8TER0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC27.53■■■□□ 2
SNED1Q8TER0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC27.53■■■□□ 2
SNED1Q8TER0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
SNED1Q8TER0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SNED1Q8TER0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
SNED1Q8TER0 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
SNED1Q8TER0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC27.52■■■□□ 2
SNED1Q8TER0 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC27.52■■■□□ 2
SNED1Q8TER0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC27.52■■■□□ 2
SNED1Q8TER0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC27.52■■■□□ 2
SNED1Q8TER0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.52■■■□□ 2
SNED1Q8TER0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC27.52■■■□□ 2
SNED1Q8TER0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC27.52■■■□□ 2
SNED1Q8TER0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC27.52■■■□□ 2
SNED1Q8TER0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SNED1Q8TER0 CDCA4P2-201ENST00000441182 718 ntBASIC27.51■■□□□ 1.99
SNED1Q8TER0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC27.51■■□□□ 1.99
SNED1Q8TER0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SNED1Q8TER0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC27.51■■□□□ 1.99
SNED1Q8TER0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC27.51■■□□□ 1.99
SNED1Q8TER0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SNED1Q8TER0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SNED1Q8TER0 AP005435.1-201ENST00000529293 1178 ntBASIC27.5■■□□□ 1.99
SNED1Q8TER0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC27.5■■□□□ 1.99
SNED1Q8TER0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.5■■□□□ 1.99
SNED1Q8TER0 AC073111.5-205ENST00000641717 521 ntBASIC27.5■■□□□ 1.99
SNED1Q8TER0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SNED1Q8TER0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SNED1Q8TER0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SNED1Q8TER0 AC080038.1-201ENST00000611274 1154 ntBASIC27.5■■□□□ 1.99
SNED1Q8TER0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
SNED1Q8TER0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNED1Q8TER0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNED1Q8TER0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC27.49■■□□□ 1.99
SNED1Q8TER0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNED1Q8TER0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
SNED1Q8TER0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC27.49■■□□□ 1.99
SNED1Q8TER0 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC27.49■■□□□ 1.99
SNED1Q8TER0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
SNED1Q8TER0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SNED1Q8TER0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SNED1Q8TER0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SNED1Q8TER0 DUX4L4-201ENST00000566884 1269 ntBASIC27.48■■□□□ 1.99
SNED1Q8TER0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC27.48■■□□□ 1.99
SNED1Q8TER0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC27.48■■□□□ 1.99
SNED1Q8TER0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
SNED1Q8TER0 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SNED1Q8TER0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC27.47■■□□□ 1.99
SNED1Q8TER0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC27.47■■□□□ 1.99
SNED1Q8TER0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC27.47■■□□□ 1.99
SNED1Q8TER0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SNED1Q8TER0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC27.47■■□□□ 1.99
SNED1Q8TER0 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SNED1Q8TER0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
SNED1Q8TER0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
SNED1Q8TER0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC27.46■■□□□ 1.99
SNED1Q8TER0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
SNED1Q8TER0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC27.46■■□□□ 1.99
SNED1Q8TER0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC27.46■■□□□ 1.99
SNED1Q8TER0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC27.46■■□□□ 1.99
SNED1Q8TER0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC27.46■■□□□ 1.99
SNED1Q8TER0 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
SNED1Q8TER0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC27.46■■□□□ 1.99
SNED1Q8TER0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
SNED1Q8TER0 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
SNED1Q8TER0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SNED1Q8TER0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.45■■□□□ 1.98
SNED1Q8TER0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC27.45■■□□□ 1.98
SNED1Q8TER0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC27.45■■□□□ 1.98
SNED1Q8TER0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SNED1Q8TER0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SNED1Q8TER0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNED1Q8TER0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SNED1Q8TER0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC27.44■■□□□ 1.98
SNED1Q8TER0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC27.44■■□□□ 1.98
SNED1Q8TER0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC27.44■■□□□ 1.98
SNED1Q8TER0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC27.44■■□□□ 1.98
SNED1Q8TER0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNED1Q8TER0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
SNED1Q8TER0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.44■■□□□ 1.98
SNED1Q8TER0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SNED1Q8TER0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC27.43■■□□□ 1.98
SNED1Q8TER0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC27.43■■□□□ 1.98
SNED1Q8TER0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
SNED1Q8TER0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SNED1Q8TER0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC27.43■■□□□ 1.98
SNED1Q8TER0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.43■■□□□ 1.98
SNED1Q8TER0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC27.43■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms