Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.65■□□□□ 0.9
CHD6Q8TD26 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.65■□□□□ 0.9
CHD6Q8TD26 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHD6Q8TD26 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.65■□□□□ 0.9
CHD6Q8TD26 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHD6Q8TD26 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CHD6Q8TD26 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHD6Q8TD26 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHD6Q8TD26 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHD6Q8TD26 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.64■□□□□ 0.9
CHD6Q8TD26 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHD6Q8TD26 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHD6Q8TD26 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD6Q8TD26 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD6Q8TD26 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.64■□□□□ 0.89
CHD6Q8TD26 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD6Q8TD26 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHD6Q8TD26 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHD6Q8TD26 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD6Q8TD26 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD6Q8TD26 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHD6Q8TD26 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHD6Q8TD26 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.63■□□□□ 0.89
CHD6Q8TD26 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CHD6Q8TD26 AC083880.1-201ENST00000608266 535 ntBASIC20.63■□□□□ 0.89
CHD6Q8TD26 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.63■□□□□ 0.89
CHD6Q8TD26 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD6Q8TD26 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD6Q8TD26 MIR4758-201ENST00000577688 71 ntBASIC20.62■□□□□ 0.89
CHD6Q8TD26 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD6Q8TD26 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD6Q8TD26 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD6Q8TD26 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.62■□□□□ 0.89
CHD6Q8TD26 AC231657.2-201ENST00000624556 255 ntBASIC20.62■□□□□ 0.89
CHD6Q8TD26 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CHD6Q8TD26 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CHD6Q8TD26 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD6Q8TD26 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CHD6Q8TD26 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.62■□□□□ 0.89
CHD6Q8TD26 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHD6Q8TD26 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.62■□□□□ 0.89
CHD6Q8TD26 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD6Q8TD26 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.62■□□□□ 0.89
CHD6Q8TD26 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CHD6Q8TD26 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.62■□□□□ 0.89
CHD6Q8TD26 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHD6Q8TD26 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
CHD6Q8TD26 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHD6Q8TD26 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CHD6Q8TD26 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHD6Q8TD26 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.61■□□□□ 0.89
CHD6Q8TD26 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD6Q8TD26 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHD6Q8TD26 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CHD6Q8TD26 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.61■□□□□ 0.89
CHD6Q8TD26 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD6Q8TD26 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHD6Q8TD26 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHD6Q8TD26 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.6■□□□□ 0.89
CHD6Q8TD26 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.6■□□□□ 0.89
CHD6Q8TD26 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CHD6Q8TD26 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD6Q8TD26 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD6Q8TD26 RCN1P1-201ENST00000400413 996 ntBASIC20.59■□□□□ 0.89
CHD6Q8TD26 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.59■□□□□ 0.89
CHD6Q8TD26 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.59■□□□□ 0.89
CHD6Q8TD26 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD6Q8TD26 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHD6Q8TD26 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.59■□□□□ 0.89
CHD6Q8TD26 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHD6Q8TD26 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CHD6Q8TD26 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.59■□□□□ 0.89
CHD6Q8TD26 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.59■□□□□ 0.89
CHD6Q8TD26 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.59■□□□□ 0.89
CHD6Q8TD26 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD6Q8TD26 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHD6Q8TD26 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CHD6Q8TD26 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHD6Q8TD26 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.58■□□□□ 0.89
CHD6Q8TD26 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.58■□□□□ 0.88
CHD6Q8TD26 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
CHD6Q8TD26 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHD6Q8TD26 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.58■□□□□ 0.88
CHD6Q8TD26 AC105036.2-201ENST00000569468 176 ntBASIC20.58■□□□□ 0.88
CHD6Q8TD26 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.58■□□□□ 0.88
CHD6Q8TD26 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.57■□□□□ 0.88
CHD6Q8TD26 MIR718-201ENST00000390190 70 ntBASIC20.57■□□□□ 0.88
CHD6Q8TD26 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.57■□□□□ 0.88
CHD6Q8TD26 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHD6Q8TD26 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.57■□□□□ 0.88
CHD6Q8TD26 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CHD6Q8TD26 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHD6Q8TD26 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHD6Q8TD26 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.57■□□□□ 0.88
CHD6Q8TD26 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.57■□□□□ 0.88
CHD6Q8TD26 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.57■□□□□ 0.88
CHD6Q8TD26 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHD6Q8TD26 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CHD6Q8TD26 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.56■□□□□ 0.88
CHD6Q8TD26 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms