Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 FP325331.1-202ENST00000623531 1380 ntBASIC19.43■□□□□ 0.7
LINC01560Q8TB33 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.43■□□□□ 0.7
LINC01560Q8TB33 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 AC123595.1-201ENST00000440769 1046 ntBASIC19.42■□□□□ 0.7
LINC01560Q8TB33 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 DUX4L4-201ENST00000566884 1269 ntBASIC19.42■□□□□ 0.7
LINC01560Q8TB33 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 RARRES2P11-201ENST00000635158 484 ntBASIC19.42■□□□□ 0.7
LINC01560Q8TB33 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LINC01560Q8TB33 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 AC090192.1-201ENST00000517740 490 ntBASIC19.41■□□□□ 0.7
LINC01560Q8TB33 AL137784.2-201ENST00000607332 1000 ntBASIC19.41■□□□□ 0.7
LINC01560Q8TB33 AL354811.1-201ENST00000610286 706 ntBASIC19.41■□□□□ 0.7
LINC01560Q8TB33 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LINC01560Q8TB33 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01560Q8TB33 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01560Q8TB33 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01560Q8TB33 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LINC01560Q8TB33 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.4■□□□□ 0.7
LINC01560Q8TB33 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.4■□□□□ 0.7
LINC01560Q8TB33 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LINC01560Q8TB33 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.4■□□□□ 0.7
LINC01560Q8TB33 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01560Q8TB33 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01560Q8TB33 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC01560Q8TB33 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.4■□□□□ 0.7
LINC01560Q8TB33 AC142381.3-201ENST00000568208 1670 ntBASIC19.4■□□□□ 0.7
LINC01560Q8TB33 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LINC01560Q8TB33 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
LINC01560Q8TB33 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01560Q8TB33 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01560Q8TB33 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.39■□□□□ 0.69
LINC01560Q8TB33 OR2I1P-207ENST00000453522 948 ntBASIC19.39■□□□□ 0.69
LINC01560Q8TB33 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.39■□□□□ 0.69
LINC01560Q8TB33 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01560Q8TB33 CCDC92B-201ENST00000575506 885 ntBASIC19.39■□□□□ 0.69
LINC01560Q8TB33 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.39■□□□□ 0.69
LINC01560Q8TB33 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01560Q8TB33 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01560Q8TB33 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01560Q8TB33 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LINC01560Q8TB33 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01560Q8TB33 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01560Q8TB33 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC01560Q8TB33 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01560Q8TB33 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01560Q8TB33 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01560Q8TB33 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
LINC01560Q8TB33 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LINC01560Q8TB33 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.38■□□□□ 0.69
LINC01560Q8TB33 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LINC01560Q8TB33 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01560Q8TB33 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01560Q8TB33 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01560Q8TB33 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01560Q8TB33 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01560Q8TB33 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC01560Q8TB33 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
LINC01560Q8TB33 LINC01529-204ENST00000636474 1715 ntBASIC19.38■□□□□ 0.69
LINC01560Q8TB33 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 AC144652.1-201ENST00000609974 1624 ntBASIC19.37■□□□□ 0.69
LINC01560Q8TB33 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.37■□□□□ 0.69
LINC01560Q8TB33 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms