Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDND2Q8NHS1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDND2Q8NHS1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDND2Q8NHS1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
CLDND2Q8NHS1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLDND2Q8NHS1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLDND2Q8NHS1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.89■□□□□ 0.62
CLDND2Q8NHS1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 AP003733.4-201ENST00000623785 1697 ntBASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 AL136967.2-201ENST00000623968 743 ntBASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 AC241377.3-202ENST00000626088 1088 ntBASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 AC241585.3-202ENST00000628937 1088 ntBASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 AC245100.8-202ENST00000629247 1058 ntBASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 ALDH1A3-203ENST00000557963 1670 ntBASIC18.89■□□□□ 0.61
CLDND2Q8NHS1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 MIR939-201ENST00000401314 82 ntBASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 AL138724.1-201ENST00000606771 1088 ntBASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDND2Q8NHS1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDND2Q8NHS1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDND2Q8NHS1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDND2Q8NHS1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDND2Q8NHS1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDND2Q8NHS1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDND2Q8NHS1 AC105265.2-201ENST00000467189 838 ntBASIC18.87■□□□□ 0.61
CLDND2Q8NHS1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDND2Q8NHS1 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDND2Q8NHS1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDND2Q8NHS1 AC011298.3-201ENST00000615796 283 ntBASIC18.87■□□□□ 0.61
CLDND2Q8NHS1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDND2Q8NHS1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDND2Q8NHS1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDND2Q8NHS1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDND2Q8NHS1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDND2Q8NHS1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDND2Q8NHS1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CLDND2Q8NHS1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.86■□□□□ 0.61
CLDND2Q8NHS1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDND2Q8NHS1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CLDND2Q8NHS1 AC006455.2-201ENST00000429931 906 ntBASIC18.86■□□□□ 0.61
CLDND2Q8NHS1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDND2Q8NHS1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.86■□□□□ 0.61
CLDND2Q8NHS1 AC009086.3-201ENST00000623486 1008 ntBASIC18.86■□□□□ 0.61
CLDND2Q8NHS1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDND2Q8NHS1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDND2Q8NHS1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CLDND2Q8NHS1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDND2Q8NHS1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDND2Q8NHS1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.85■□□□□ 0.61
CLDND2Q8NHS1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDND2Q8NHS1 AC091305.1-201ENST00000479476 895 ntBASIC18.85■□□□□ 0.61
CLDND2Q8NHS1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CLDND2Q8NHS1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDND2Q8NHS1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CLDND2Q8NHS1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDND2Q8NHS1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDND2Q8NHS1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDND2Q8NHS1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDND2Q8NHS1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDND2Q8NHS1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDND2Q8NHS1 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDND2Q8NHS1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.84■□□□□ 0.61
CLDND2Q8NHS1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDND2Q8NHS1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDND2Q8NHS1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDND2Q8NHS1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDND2Q8NHS1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDND2Q8NHS1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDND2Q8NHS1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.83■□□□□ 0.61
CLDND2Q8NHS1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDND2Q8NHS1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CLDND2Q8NHS1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.83■□□□□ 0.61
CLDND2Q8NHS1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CLDND2Q8NHS1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms