Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.41■■□□□ 1.82
SLC44A5Q8NCS7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.41■■□□□ 1.82
SLC44A5Q8NCS7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
SLC44A5Q8NCS7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC26.41■■□□□ 1.82
SLC44A5Q8NCS7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.41■■□□□ 1.82
SLC44A5Q8NCS7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SLC44A5Q8NCS7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.41■■□□□ 1.82
SLC44A5Q8NCS7 FP325331.1-202ENST00000623531 1380 ntBASIC26.41■■□□□ 1.82
SLC44A5Q8NCS7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.41■■□□□ 1.82
SLC44A5Q8NCS7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.4■■□□□ 1.82
SLC44A5Q8NCS7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SLC44A5Q8NCS7 LINC01529-204ENST00000636474 1715 ntBASIC26.4■■□□□ 1.82
SLC44A5Q8NCS7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
SLC44A5Q8NCS7 AC010525.1-201ENST00000585559 441 ntBASIC26.4■■□□□ 1.82
SLC44A5Q8NCS7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SLC44A5Q8NCS7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.39■■□□□ 1.82
SLC44A5Q8NCS7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
SLC44A5Q8NCS7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.82
SLC44A5Q8NCS7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SLC44A5Q8NCS7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SLC44A5Q8NCS7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SLC44A5Q8NCS7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SLC44A5Q8NCS7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
SLC44A5Q8NCS7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SLC44A5Q8NCS7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SLC44A5Q8NCS7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
SLC44A5Q8NCS7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SLC44A5Q8NCS7 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.38■■□□□ 1.81
SLC44A5Q8NCS7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SLC44A5Q8NCS7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
SLC44A5Q8NCS7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
SLC44A5Q8NCS7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SLC44A5Q8NCS7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
SLC44A5Q8NCS7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC44A5Q8NCS7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC44A5Q8NCS7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC44A5Q8NCS7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.37■■□□□ 1.81
SLC44A5Q8NCS7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC44A5Q8NCS7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC44A5Q8NCS7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.37■■□□□ 1.81
SLC44A5Q8NCS7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.37■■□□□ 1.81
SLC44A5Q8NCS7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC44A5Q8NCS7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SLC44A5Q8NCS7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.37■■□□□ 1.81
SLC44A5Q8NCS7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SLC44A5Q8NCS7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
SLC44A5Q8NCS7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.36■■□□□ 1.81
SLC44A5Q8NCS7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SLC44A5Q8NCS7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.36■■□□□ 1.81
SLC44A5Q8NCS7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.36■■□□□ 1.81
SLC44A5Q8NCS7 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.36■■□□□ 1.81
SLC44A5Q8NCS7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.36■■□□□ 1.81
SLC44A5Q8NCS7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SLC44A5Q8NCS7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
SLC44A5Q8NCS7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
SLC44A5Q8NCS7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
SLC44A5Q8NCS7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SLC44A5Q8NCS7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SLC44A5Q8NCS7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SLC44A5Q8NCS7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.35■■□□□ 1.81
SLC44A5Q8NCS7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.35■■□□□ 1.81
SLC44A5Q8NCS7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.35■■□□□ 1.81
SLC44A5Q8NCS7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SLC44A5Q8NCS7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SLC44A5Q8NCS7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.34■■□□□ 1.81
SLC44A5Q8NCS7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.34■■□□□ 1.81
SLC44A5Q8NCS7 AC126544.1-201ENST00000580842 1059 ntBASIC26.34■■□□□ 1.81
SLC44A5Q8NCS7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
SLC44A5Q8NCS7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SLC44A5Q8NCS7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SLC44A5Q8NCS7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SLC44A5Q8NCS7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SLC44A5Q8NCS7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SLC44A5Q8NCS7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SLC44A5Q8NCS7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
SLC44A5Q8NCS7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.33■■□□□ 1.81
SLC44A5Q8NCS7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC26.33■■□□□ 1.81
SLC44A5Q8NCS7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SLC44A5Q8NCS7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.33■■□□□ 1.81
SLC44A5Q8NCS7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.32■■□□□ 1.8
SLC44A5Q8NCS7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SLC44A5Q8NCS7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SLC44A5Q8NCS7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SLC44A5Q8NCS7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.32■■□□□ 1.8
SLC44A5Q8NCS7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLC44A5Q8NCS7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SLC44A5Q8NCS7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.31■■□□□ 1.8
SLC44A5Q8NCS7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SLC44A5Q8NCS7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.31■■□□□ 1.8
SLC44A5Q8NCS7 AC092666.2-201ENST00000613287 246 ntBASIC26.31■■□□□ 1.8
SLC44A5Q8NCS7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.31■■□□□ 1.8
SLC44A5Q8NCS7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
SLC44A5Q8NCS7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
SLC44A5Q8NCS7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
SLC44A5Q8NCS7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
SLC44A5Q8NCS7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SLC44A5Q8NCS7 IRS3P-201ENST00000223076 1006 ntBASIC26.3■■□□□ 1.8
SLC44A5Q8NCS7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
SLC44A5Q8NCS7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.3■■□□□ 1.8
SLC44A5Q8NCS7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms