Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIML2Q8N7C3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIML2Q8N7C3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIML2Q8N7C3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIML2Q8N7C3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIML2Q8N7C3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIML2Q8N7C3 ATP5G2P3-201ENST00000429083 425 ntBASIC21.42■■□□□ 1.02
TRIML2Q8N7C3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.42■■□□□ 1.02
TRIML2Q8N7C3 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.42■■□□□ 1.02
TRIML2Q8N7C3 AC120024.1-201ENST00000562672 995 ntBASIC21.42■■□□□ 1.02
TRIML2Q8N7C3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
TRIML2Q8N7C3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIML2Q8N7C3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
TRIML2Q8N7C3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
TRIML2Q8N7C3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.42■■□□□ 1.02
TRIML2Q8N7C3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIML2Q8N7C3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TRIML2Q8N7C3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIML2Q8N7C3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIML2Q8N7C3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIML2Q8N7C3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIML2Q8N7C3 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIML2Q8N7C3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TRIML2Q8N7C3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIML2Q8N7C3 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.41■■□□□ 1.02
TRIML2Q8N7C3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIML2Q8N7C3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIML2Q8N7C3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
TRIML2Q8N7C3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 KRT18P24-201ENST00000344739 1156 ntBASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 AC004987.1-201ENST00000428627 508 ntBASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 THA1P-201ENST00000590384 1145 ntBASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIML2Q8N7C3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRIML2Q8N7C3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.02
TRIML2Q8N7C3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
TRIML2Q8N7C3 DUSP8P3-201ENST00000399571 1760 ntBASIC21.39■■□□□ 1.01
TRIML2Q8N7C3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TRIML2Q8N7C3 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIML2Q8N7C3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIML2Q8N7C3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.39■■□□□ 1.01
TRIML2Q8N7C3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
TRIML2Q8N7C3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIML2Q8N7C3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
TRIML2Q8N7C3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.39■■□□□ 1.01
TRIML2Q8N7C3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.38■■□□□ 1.01
TRIML2Q8N7C3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.38■■□□□ 1.01
TRIML2Q8N7C3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIML2Q8N7C3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIML2Q8N7C3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIML2Q8N7C3 TSPY13P-201ENST00000338964 914 ntBASIC21.38■■□□□ 1.01
TRIML2Q8N7C3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIML2Q8N7C3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.38■■□□□ 1.01
TRIML2Q8N7C3 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIML2Q8N7C3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIML2Q8N7C3 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TRIML2Q8N7C3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TRIML2Q8N7C3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIML2Q8N7C3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TRIML2Q8N7C3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.37■■□□□ 1.01
TRIML2Q8N7C3 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIML2Q8N7C3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIML2Q8N7C3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIML2Q8N7C3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.37■■□□□ 1.01
TRIML2Q8N7C3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIML2Q8N7C3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIML2Q8N7C3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIML2Q8N7C3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.37■■□□□ 1.01
TRIML2Q8N7C3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TRIML2Q8N7C3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 GUSBP5-202ENST00000510805 1989 ntBASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TRIML2Q8N7C3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIML2Q8N7C3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.35■■□□□ 1.01
TRIML2Q8N7C3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TRIML2Q8N7C3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TRIML2Q8N7C3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms