Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.18■■□□□ 1.14
TRIM42Q8IWZ5 AC092053.2-201ENST00000640557 1818 ntBASIC22.18■■□□□ 1.14
TRIM42Q8IWZ5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM42Q8IWZ5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM42Q8IWZ5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TRIM42Q8IWZ5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
TRIM42Q8IWZ5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.17■■□□□ 1.14
TRIM42Q8IWZ5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM42Q8IWZ5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM42Q8IWZ5 AC007375.3-201ENST00000600936 2314 ntBASIC22.17■■□□□ 1.14
TRIM42Q8IWZ5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.17■■□□□ 1.14
TRIM42Q8IWZ5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.17■■□□□ 1.14
TRIM42Q8IWZ5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.17■■□□□ 1.14
TRIM42Q8IWZ5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM42Q8IWZ5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM42Q8IWZ5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM42Q8IWZ5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM42Q8IWZ5 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM42Q8IWZ5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TRIM42Q8IWZ5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 AC079630.1-202ENST00000618127 1840 ntBASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 AC011551.1-201ENST00000614101 683 ntBASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.16■■□□□ 1.14
TRIM42Q8IWZ5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 C11orf96-202ENST00000528572 1834 ntBASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.15■■□□□ 1.14
TRIM42Q8IWZ5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TRIM42Q8IWZ5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRIM42Q8IWZ5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRIM42Q8IWZ5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TRIM42Q8IWZ5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TRIM42Q8IWZ5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRIM42Q8IWZ5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
TRIM42Q8IWZ5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
TRIM42Q8IWZ5 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM42Q8IWZ5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM42Q8IWZ5 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM42Q8IWZ5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM42Q8IWZ5 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.14■■□□□ 1.13
TRIM42Q8IWZ5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
TRIM42Q8IWZ5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
TRIM42Q8IWZ5 KRT18P60-201ENST00000312876 1297 ntBASIC22.13■■□□□ 1.13
TRIM42Q8IWZ5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.13■■□□□ 1.13
TRIM42Q8IWZ5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM42Q8IWZ5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM42Q8IWZ5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
TRIM42Q8IWZ5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.13■■□□□ 1.13
TRIM42Q8IWZ5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
TRIM42Q8IWZ5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
TRIM42Q8IWZ5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRIM42Q8IWZ5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRIM42Q8IWZ5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.12■■□□□ 1.13
TRIM42Q8IWZ5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRIM42Q8IWZ5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRIM42Q8IWZ5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRIM42Q8IWZ5 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRIM42Q8IWZ5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.12■■□□□ 1.13
TRIM42Q8IWZ5 AC012354.3-201ENST00000623734 483 ntBASIC22.12■■□□□ 1.13
TRIM42Q8IWZ5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
TRIM42Q8IWZ5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
TRIM42Q8IWZ5 AC139530.1-201ENST00000575312 1977 ntBASIC22.12■■□□□ 1.13
TRIM42Q8IWZ5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
TRIM42Q8IWZ5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TRIM42Q8IWZ5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
TRIM42Q8IWZ5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.11■■□□□ 1.13
TRIM42Q8IWZ5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM42Q8IWZ5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM42Q8IWZ5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM42Q8IWZ5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.11■■□□□ 1.13
TRIM42Q8IWZ5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM42Q8IWZ5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
TRIM42Q8IWZ5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM42Q8IWZ5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TRIM42Q8IWZ5 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms