Protein–RNA interactions for Protein: Q86XK3

SFR1, Swi5-dependent recombination DNA repair protein 1 homolog, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1Q86XK3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SFR1Q86XK3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.69■■□□□ 1.54
SFR1Q86XK3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
SFR1Q86XK3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
SFR1Q86XK3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SFR1Q86XK3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.68■■□□□ 1.54
SFR1Q86XK3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SFR1Q86XK3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
SFR1Q86XK3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.68■■□□□ 1.54
SFR1Q86XK3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.68■■□□□ 1.54
SFR1Q86XK3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
SFR1Q86XK3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.68■■□□□ 1.54
SFR1Q86XK3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.68■■□□□ 1.54
SFR1Q86XK3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.68■■□□□ 1.54
SFR1Q86XK3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SFR1Q86XK3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SFR1Q86XK3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.68■■□□□ 1.54
SFR1Q86XK3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
SFR1Q86XK3 DUX4L4-201ENST00000566884 1269 ntBASIC24.67■■□□□ 1.54
SFR1Q86XK3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SFR1Q86XK3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.67■■□□□ 1.54
SFR1Q86XK3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
SFR1Q86XK3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SFR1Q86XK3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SFR1Q86XK3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SFR1Q86XK3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.67■■□□□ 1.54
SFR1Q86XK3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SFR1Q86XK3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SFR1Q86XK3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SFR1Q86XK3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SFR1Q86XK3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SFR1Q86XK3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SFR1Q86XK3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
SFR1Q86XK3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.66■■□□□ 1.54
SFR1Q86XK3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
SFR1Q86XK3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SFR1Q86XK3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
SFR1Q86XK3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SFR1Q86XK3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
SFR1Q86XK3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.65■■□□□ 1.54
SFR1Q86XK3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SFR1Q86XK3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.65■■□□□ 1.54
SFR1Q86XK3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SFR1Q86XK3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SFR1Q86XK3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
SFR1Q86XK3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.64■■□□□ 1.54
SFR1Q86XK3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SFR1Q86XK3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
SFR1Q86XK3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SFR1Q86XK3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SFR1Q86XK3 AC006455.2-201ENST00000429931 906 ntBASIC24.64■■□□□ 1.54
SFR1Q86XK3 SRD5A1P1-201ENST00000442297 786 ntBASIC24.64■■□□□ 1.54
SFR1Q86XK3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
SFR1Q86XK3 AC099791.2-201ENST00000605725 427 ntBASIC24.64■■□□□ 1.54
SFR1Q86XK3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
SFR1Q86XK3 AC068473.5-201ENST00000616428 2072 ntBASIC24.64■■□□□ 1.53
SFR1Q86XK3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.64■■□□□ 1.53
SFR1Q86XK3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
SFR1Q86XK3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.64■■□□□ 1.53
SFR1Q86XK3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.64■■□□□ 1.53
SFR1Q86XK3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.64■■□□□ 1.53
SFR1Q86XK3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
SFR1Q86XK3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.64■■□□□ 1.53
SFR1Q86XK3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
SFR1Q86XK3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC24.63■■□□□ 1.53
SFR1Q86XK3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.63■■□□□ 1.53
SFR1Q86XK3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.63■■□□□ 1.53
SFR1Q86XK3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SFR1Q86XK3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SFR1Q86XK3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC24.62■■□□□ 1.53
SFR1Q86XK3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SFR1Q86XK3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SFR1Q86XK3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SFR1Q86XK3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC24.62■■□□□ 1.53
SFR1Q86XK3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SFR1Q86XK3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
SFR1Q86XK3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SFR1Q86XK3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.62■■□□□ 1.53
SFR1Q86XK3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.62■■□□□ 1.53
SFR1Q86XK3 AC009086.3-201ENST00000623486 1008 ntBASIC24.62■■□□□ 1.53
SFR1Q86XK3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.62■■□□□ 1.53
SFR1Q86XK3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.62■■□□□ 1.53
SFR1Q86XK3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SFR1Q86XK3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.61■■□□□ 1.53
SFR1Q86XK3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SFR1Q86XK3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SFR1Q86XK3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.61■■□□□ 1.53
SFR1Q86XK3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SFR1Q86XK3 AC241377.3-202ENST00000626088 1088 ntBASIC24.61■■□□□ 1.53
SFR1Q86XK3 AC241585.3-202ENST00000628937 1088 ntBASIC24.61■■□□□ 1.53
SFR1Q86XK3 AC245100.8-202ENST00000629247 1058 ntBASIC24.61■■□□□ 1.53
SFR1Q86XK3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.61■■□□□ 1.53
SFR1Q86XK3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.61■■□□□ 1.53
SFR1Q86XK3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SFR1Q86XK3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
SFR1Q86XK3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SFR1Q86XK3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SFR1Q86XK3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
SFR1Q86XK3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.61■■□□□ 1.53
SFR1Q86XK3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms