Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.74■□□□□ 0.11
CSMD3Q7Z407 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD3Q7Z407 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD3Q7Z407 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CSMD3Q7Z407 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.74■□□□□ 0.11
CSMD3Q7Z407 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.74■□□□□ 0.11
CSMD3Q7Z407 AL109923.1-201ENST00000618799 583 ntBASIC15.74■□□□□ 0.11
CSMD3Q7Z407 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD3Q7Z407 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD3Q7Z407 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 AC137761.2-201ENST00000561729 223 ntBASIC15.73■□□□□ 0.11
CSMD3Q7Z407 AC145350.3-201ENST00000569033 163 ntBASIC15.73■□□□□ 0.11
CSMD3Q7Z407 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 AC004854.2-201ENST00000608450 1441 ntBASIC15.73■□□□□ 0.11
CSMD3Q7Z407 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 TSPY20P-201ENST00000450910 630 ntBASIC15.73■□□□□ 0.11
CSMD3Q7Z407 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD3Q7Z407 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.72■□□□□ 0.11
CSMD3Q7Z407 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD3Q7Z407 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD3Q7Z407 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.72■□□□□ 0.11
CSMD3Q7Z407 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC15.72■□□□□ 0.11
CSMD3Q7Z407 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD3Q7Z407 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CSMD3Q7Z407 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC15.72■□□□□ 0.11
CSMD3Q7Z407 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC15.72■□□□□ 0.11
CSMD3Q7Z407 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CSMD3Q7Z407 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
CSMD3Q7Z407 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 MIR6089-201ENST00000616698 64 ntBASIC15.71■□□□□ 0.11
CSMD3Q7Z407 AC009086.3-201ENST00000623486 1008 ntBASIC15.71■□□□□ 0.11
CSMD3Q7Z407 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CSMD3Q7Z407 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.71■□□□□ 0.1
CSMD3Q7Z407 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 AL050303.2-201ENST00000619798 666 ntBASIC15.7■□□□□ 0.1
CSMD3Q7Z407 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 HLA-L-211ENST00000482052 1765 ntBASIC15.7■□□□□ 0.1
CSMD3Q7Z407 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.7■□□□□ 0.1
CSMD3Q7Z407 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CSMD3Q7Z407 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CSMD3Q7Z407 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD3Q7Z407 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.69■□□□□ 0.1
CSMD3Q7Z407 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD3Q7Z407 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 TMEM191A-211ENST00000637163 1067 ntBASIC15.68■□□□□ 0.1
CSMD3Q7Z407 AL121749.1-202ENST00000609313 2153 ntBASIC15.68■□□□□ 0.1
CSMD3Q7Z407 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD3Q7Z407 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms