Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PTCRAQ6ISU1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PTCRAQ6ISU1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PTCRAQ6ISU1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTCRAQ6ISU1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.35■■□□□ 1.33
PTCRAQ6ISU1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTCRAQ6ISU1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTCRAQ6ISU1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCRAQ6ISU1 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PTCRAQ6ISU1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCRAQ6ISU1 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.34■■□□□ 1.33
PTCRAQ6ISU1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCRAQ6ISU1 KRT18P11-201ENST00000435214 1283 ntBASIC23.34■■□□□ 1.33
PTCRAQ6ISU1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.34■■□□□ 1.33
PTCRAQ6ISU1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.34■■□□□ 1.33
PTCRAQ6ISU1 MIR6089-201ENST00000616698 64 ntBASIC23.34■■□□□ 1.33
PTCRAQ6ISU1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCRAQ6ISU1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCRAQ6ISU1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.33■■□□□ 1.33
PTCRAQ6ISU1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PTCRAQ6ISU1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.33■■□□□ 1.33
PTCRAQ6ISU1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.33■■□□□ 1.33
PTCRAQ6ISU1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.33■■□□□ 1.33
PTCRAQ6ISU1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PTCRAQ6ISU1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.33■■□□□ 1.33
PTCRAQ6ISU1 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.33■■□□□ 1.33
PTCRAQ6ISU1 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTCRAQ6ISU1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PTCRAQ6ISU1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
PTCRAQ6ISU1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PTCRAQ6ISU1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PTCRAQ6ISU1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.32■■□□□ 1.32
PTCRAQ6ISU1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCRAQ6ISU1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PTCRAQ6ISU1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
PTCRAQ6ISU1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCRAQ6ISU1 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTCRAQ6ISU1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 FAM201B-201ENST00000458407 597 ntBASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 MIR4651-201ENST00000582622 73 ntBASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 AL121832.2-201ENST00000610979 668 ntBASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.31■■□□□ 1.32
PTCRAQ6ISU1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PTCRAQ6ISU1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.3■■□□□ 1.32
PTCRAQ6ISU1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.3■■□□□ 1.32
PTCRAQ6ISU1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCRAQ6ISU1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCRAQ6ISU1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.3■■□□□ 1.32
PTCRAQ6ISU1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PTCRAQ6ISU1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCRAQ6ISU1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PTCRAQ6ISU1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PTCRAQ6ISU1 AC142086.6-201ENST00000621154 1765 ntBASIC23.29■■□□□ 1.32
PTCRAQ6ISU1 SLC6A10P-202ENST00000431994 2058 ntBASIC23.29■■□□□ 1.32
PTCRAQ6ISU1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTCRAQ6ISU1 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.29■■□□□ 1.32
PTCRAQ6ISU1 AL161729.1-201ENST00000604104 1402 ntBASIC23.29■■□□□ 1.32
PTCRAQ6ISU1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PTCRAQ6ISU1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTCRAQ6ISU1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.29■■□□□ 1.32
PTCRAQ6ISU1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTCRAQ6ISU1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PTCRAQ6ISU1 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PTCRAQ6ISU1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
PTCRAQ6ISU1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PTCRAQ6ISU1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PTCRAQ6ISU1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PTCRAQ6ISU1 AC083906.2-201ENST00000511578 360 ntBASIC23.28■■□□□ 1.32
PTCRAQ6ISU1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
PTCRAQ6ISU1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PTCRAQ6ISU1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 TSPY6P-201ENST00000448518 926 ntBASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PTCRAQ6ISU1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PTCRAQ6ISU1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PTCRAQ6ISU1 ALDH1A3-203ENST00000557963 1670 ntBASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms