Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTL6Q6ICC9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTL6Q6ICC9 MIR6821-201ENST00000617625 74 ntBASIC20.09■□□□□ 0.81
RTL6Q6ICC9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL6Q6ICC9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RTL6Q6ICC9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RTL6Q6ICC9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL6Q6ICC9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RTL6Q6ICC9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL6Q6ICC9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RTL6Q6ICC9 IRS3P-201ENST00000223076 1006 ntBASIC20.08■□□□□ 0.81
RTL6Q6ICC9 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.08■□□□□ 0.81
RTL6Q6ICC9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RTL6Q6ICC9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.08■□□□□ 0.81
RTL6Q6ICC9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RTL6Q6ICC9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RTL6Q6ICC9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RTL6Q6ICC9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 AC092666.2-201ENST00000613287 246 ntBASIC20.07■□□□□ 0.8
RTL6Q6ICC9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RTL6Q6ICC9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL6Q6ICC9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL6Q6ICC9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL6Q6ICC9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL6Q6ICC9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
RTL6Q6ICC9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL6Q6ICC9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL6Q6ICC9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL6Q6ICC9 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL6Q6ICC9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTL6Q6ICC9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RTL6Q6ICC9 AC097381.1-201ENST00000429019 1296 ntBASIC20.06■□□□□ 0.8
RTL6Q6ICC9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.06■□□□□ 0.8
RTL6Q6ICC9 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.06■□□□□ 0.8
RTL6Q6ICC9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RTL6Q6ICC9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
RTL6Q6ICC9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTL6Q6ICC9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RTL6Q6ICC9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.05■□□□□ 0.8
RTL6Q6ICC9 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RTL6Q6ICC9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.05■□□□□ 0.8
RTL6Q6ICC9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RTL6Q6ICC9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL6Q6ICC9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL6Q6ICC9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL6Q6ICC9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RTL6Q6ICC9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RTL6Q6ICC9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL6Q6ICC9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.04■□□□□ 0.8
RTL6Q6ICC9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.04■□□□□ 0.8
RTL6Q6ICC9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RTL6Q6ICC9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.04■□□□□ 0.8
RTL6Q6ICC9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL6Q6ICC9 AC087623.3-201ENST00000607047 1098 ntBASIC20.04■□□□□ 0.8
RTL6Q6ICC9 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL6Q6ICC9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RTL6Q6ICC9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.03■□□□□ 0.8
RTL6Q6ICC9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.03■□□□□ 0.8
RTL6Q6ICC9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RTL6Q6ICC9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RTL6Q6ICC9 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.03■□□□□ 0.8
RTL6Q6ICC9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.03■□□□□ 0.8
RTL6Q6ICC9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.03■□□□□ 0.8
RTL6Q6ICC9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
RTL6Q6ICC9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RTL6Q6ICC9 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RTL6Q6ICC9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
RTL6Q6ICC9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL6Q6ICC9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.02■□□□□ 0.8
RTL6Q6ICC9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL6Q6ICC9 AC012676.1-201ENST00000574705 1949 ntBASIC20.02■□□□□ 0.8
RTL6Q6ICC9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL6Q6ICC9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL6Q6ICC9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
RTL6Q6ICC9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL6Q6ICC9 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.02■□□□□ 0.8
RTL6Q6ICC9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.02■□□□□ 0.8
RTL6Q6ICC9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL6Q6ICC9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL6Q6ICC9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RTL6Q6ICC9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTL6Q6ICC9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
RTL6Q6ICC9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
RTL6Q6ICC9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTL6Q6ICC9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTL6Q6ICC9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.01■□□□□ 0.79
RTL6Q6ICC9 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms