Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LPCAT4Q643R3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LPCAT4Q643R3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.04■□□□□ 0.96
LPCAT4Q643R3 AL157400.5-201ENST00000507624 621 ntBASIC21.04■□□□□ 0.96
LPCAT4Q643R3 DUX4L11-201ENST00000611504 1267 ntBASIC21.04■□□□□ 0.96
LPCAT4Q643R3 DUX4L12-201ENST00000614593 1267 ntBASIC21.04■□□□□ 0.96
LPCAT4Q643R3 DUX4L14-201ENST00000621227 1267 ntBASIC21.04■□□□□ 0.96
LPCAT4Q643R3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LPCAT4Q643R3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.04■□□□□ 0.96
LPCAT4Q643R3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
LPCAT4Q643R3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LPCAT4Q643R3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.04■□□□□ 0.96
LPCAT4Q643R3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.04■□□□□ 0.96
LPCAT4Q643R3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LPCAT4Q643R3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
LPCAT4Q643R3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LPCAT4Q643R3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LPCAT4Q643R3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LPCAT4Q643R3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LPCAT4Q643R3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.03■□□□□ 0.96
LPCAT4Q643R3 RPS2P35-201ENST00000443417 897 ntBASIC21.03■□□□□ 0.96
LPCAT4Q643R3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.03■□□□□ 0.96
LPCAT4Q643R3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LPCAT4Q643R3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LPCAT4Q643R3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LPCAT4Q643R3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LPCAT4Q643R3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LPCAT4Q643R3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LPCAT4Q643R3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LPCAT4Q643R3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
LPCAT4Q643R3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LPCAT4Q643R3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LPCAT4Q643R3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
LPCAT4Q643R3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LPCAT4Q643R3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.02■□□□□ 0.96
LPCAT4Q643R3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LPCAT4Q643R3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LPCAT4Q643R3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.02■□□□□ 0.96
LPCAT4Q643R3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
LPCAT4Q643R3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LPCAT4Q643R3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LPCAT4Q643R3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LPCAT4Q643R3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LPCAT4Q643R3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
LPCAT4Q643R3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.01■□□□□ 0.95
LPCAT4Q643R3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
LPCAT4Q643R3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LPCAT4Q643R3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
LPCAT4Q643R3 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LPCAT4Q643R3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21■□□□□ 0.95
LPCAT4Q643R3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LPCAT4Q643R3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21■□□□□ 0.95
LPCAT4Q643R3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LPCAT4Q643R3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LPCAT4Q643R3 RNF165-205ENST00000588679 2904 ntBASIC21■□□□□ 0.95
LPCAT4Q643R3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
LPCAT4Q643R3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.99■□□□□ 0.95
LPCAT4Q643R3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LPCAT4Q643R3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LPCAT4Q643R3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LPCAT4Q643R3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LPCAT4Q643R3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LPCAT4Q643R3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LPCAT4Q643R3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LPCAT4Q643R3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LPCAT4Q643R3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms