Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RNF20Q5VTR2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
RNF20Q5VTR2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RNF20Q5VTR2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
RNF20Q5VTR2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.63■■□□□ 1.85
RNF20Q5VTR2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
RNF20Q5VTR2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC26.61■■□□□ 1.85
RNF20Q5VTR2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.61■■□□□ 1.85
RNF20Q5VTR2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RNF20Q5VTR2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RNF20Q5VTR2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RNF20Q5VTR2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RNF20Q5VTR2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RNF20Q5VTR2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.6■■□□□ 1.85
RNF20Q5VTR2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.6■■□□□ 1.85
RNF20Q5VTR2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.6■■□□□ 1.85
RNF20Q5VTR2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RNF20Q5VTR2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RNF20Q5VTR2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.6■■□□□ 1.85
RNF20Q5VTR2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
RNF20Q5VTR2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RNF20Q5VTR2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
RNF20Q5VTR2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
RNF20Q5VTR2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.59■■□□□ 1.85
RNF20Q5VTR2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.58■■□□□ 1.85
RNF20Q5VTR2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.58■■□□□ 1.85
RNF20Q5VTR2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.58■■□□□ 1.85
RNF20Q5VTR2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.58■■□□□ 1.85
RNF20Q5VTR2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.58■■□□□ 1.85
RNF20Q5VTR2 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RNF20Q5VTR2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.58■■□□□ 1.85
RNF20Q5VTR2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RNF20Q5VTR2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.58■■□□□ 1.85
RNF20Q5VTR2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.58■■□□□ 1.85
RNF20Q5VTR2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.58■■□□□ 1.85
RNF20Q5VTR2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RNF20Q5VTR2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.58■■□□□ 1.84
RNF20Q5VTR2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.58■■□□□ 1.84
RNF20Q5VTR2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF20Q5VTR2 C1orf229-201ENST00000623686 2258 ntBASIC26.57■■□□□ 1.84
RNF20Q5VTR2 C17orf82-201ENST00000623772 1530 ntBASIC26.57■■□□□ 1.84
RNF20Q5VTR2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
RNF20Q5VTR2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.57■■□□□ 1.84
RNF20Q5VTR2 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.57■■□□□ 1.84
RNF20Q5VTR2 DUX4L4-201ENST00000566884 1269 ntBASIC26.57■■□□□ 1.84
RNF20Q5VTR2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.57■■□□□ 1.84
RNF20Q5VTR2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF20Q5VTR2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.56■■□□□ 1.84
RNF20Q5VTR2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RNF20Q5VTR2 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.55■■□□□ 1.84
RNF20Q5VTR2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RNF20Q5VTR2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.54■■□□□ 1.84
RNF20Q5VTR2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.54■■□□□ 1.84
RNF20Q5VTR2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF20Q5VTR2 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.54■■□□□ 1.84
RNF20Q5VTR2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.54■■□□□ 1.84
RNF20Q5VTR2 AL117332.1-201ENST00000622628 974 ntBASIC26.54■■□□□ 1.84
RNF20Q5VTR2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
RNF20Q5VTR2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
RNF20Q5VTR2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.54■■□□□ 1.84
RNF20Q5VTR2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF20Q5VTR2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RNF20Q5VTR2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
RNF20Q5VTR2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF20Q5VTR2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF20Q5VTR2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
RNF20Q5VTR2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF20Q5VTR2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.53■■□□□ 1.84
RNF20Q5VTR2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.53■■□□□ 1.84
RNF20Q5VTR2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF20Q5VTR2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RNF20Q5VTR2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.53■■□□□ 1.84
RNF20Q5VTR2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF20Q5VTR2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
RNF20Q5VTR2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.52■■□□□ 1.84
RNF20Q5VTR2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.52■■□□□ 1.84
RNF20Q5VTR2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
RNF20Q5VTR2 AL356740.2-201ENST00000601559 647 ntBASIC26.52■■□□□ 1.84
RNF20Q5VTR2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.51■■□□□ 1.84
RNF20Q5VTR2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.51■■□□□ 1.83
RNF20Q5VTR2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RNF20Q5VTR2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
RNF20Q5VTR2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RNF20Q5VTR2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms