Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.68■□□□□ 0.74
TFF3Q07654 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.68■□□□□ 0.74
TFF3Q07654 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.68■□□□□ 0.74
TFF3Q07654 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TFF3Q07654 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.67■□□□□ 0.74
TFF3Q07654 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.67■□□□□ 0.74
TFF3Q07654 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.67■□□□□ 0.74
TFF3Q07654 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
TFF3Q07654 CCDC92B-201ENST00000575506 885 ntBASIC19.67■□□□□ 0.74
TFF3Q07654 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.67■□□□□ 0.74
TFF3Q07654 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.67■□□□□ 0.74
TFF3Q07654 AC133637.1-201ENST00000624115 1537 ntBASIC19.66■□□□□ 0.74
TFF3Q07654 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TFF3Q07654 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TFF3Q07654 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TFF3Q07654 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.66■□□□□ 0.74
TFF3Q07654 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TFF3Q07654 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.66■□□□□ 0.74
TFF3Q07654 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TFF3Q07654 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TFF3Q07654 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TFF3Q07654 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TFF3Q07654 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TFF3Q07654 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TFF3Q07654 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TFF3Q07654 AC004911.1-201ENST00000416316 871 ntBASIC19.65■□□□□ 0.74
TFF3Q07654 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.65■□□□□ 0.74
TFF3Q07654 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.65■□□□□ 0.74
TFF3Q07654 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TFF3Q07654 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TFF3Q07654 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.64■□□□□ 0.74
TFF3Q07654 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TFF3Q07654 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TFF3Q07654 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TFF3Q07654 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.64■□□□□ 0.73
TFF3Q07654 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.64■□□□□ 0.73
TFF3Q07654 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.64■□□□□ 0.73
TFF3Q07654 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.64■□□□□ 0.73
TFF3Q07654 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.64■□□□□ 0.73
TFF3Q07654 AL499627.2-201ENST00000606283 725 ntBASIC19.64■□□□□ 0.73
TFF3Q07654 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TFF3Q07654 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.64■□□□□ 0.73
TFF3Q07654 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TFF3Q07654 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TFF3Q07654 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TFF3Q07654 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TFF3Q07654 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TFF3Q07654 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TFF3Q07654 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.63■□□□□ 0.73
TFF3Q07654 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TFF3Q07654 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF3Q07654 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TFF3Q07654 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF3Q07654 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF3Q07654 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.63■□□□□ 0.73
TFF3Q07654 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TFF3Q07654 TERF1P2-201ENST00000583350 1212 ntBASIC19.63■□□□□ 0.73
TFF3Q07654 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TFF3Q07654 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
TFF3Q07654 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TFF3Q07654 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.62■□□□□ 0.73
TFF3Q07654 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.62■□□□□ 0.73
TFF3Q07654 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.62■□□□□ 0.73
TFF3Q07654 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TFF3Q07654 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TFF3Q07654 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TFF3Q07654 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TFF3Q07654 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.62■□□□□ 0.73
TFF3Q07654 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TFF3Q07654 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.62■□□□□ 0.73
TFF3Q07654 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.62■□□□□ 0.73
TFF3Q07654 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TFF3Q07654 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TFF3Q07654 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.62■□□□□ 0.73
TFF3Q07654 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TFF3Q07654 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TFF3Q07654 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TFF3Q07654 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TFF3Q07654 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.61■□□□□ 0.73
TFF3Q07654 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TFF3Q07654 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.61■□□□□ 0.73
TFF3Q07654 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TFF3Q07654 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TFF3Q07654 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TFF3Q07654 OR2I1P-207ENST00000453522 948 ntBASIC19.61■□□□□ 0.73
TFF3Q07654 KRT18P14-201ENST00000534205 1250 ntBASIC19.61■□□□□ 0.73
TFF3Q07654 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.61■□□□□ 0.73
TFF3Q07654 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TFF3Q07654 AC010525.1-201ENST00000585559 441 ntBASIC19.61■□□□□ 0.73
TFF3Q07654 NTF6G-201ENST00000591094 616 ntBASIC19.61■□□□□ 0.73
TFF3Q07654 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.61■□□□□ 0.73
TFF3Q07654 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.61■□□□□ 0.73
TFF3Q07654 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TFF3Q07654 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TFF3Q07654 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TFF3Q07654 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TFF3Q07654 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TFF3Q07654 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TFF3Q07654 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TFF3Q07654 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms