Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.91■□□□□ 0.46
CX3CL1P78423 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.91■□□□□ 0.46
CX3CL1P78423 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.91■□□□□ 0.46
CX3CL1P78423 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.91■□□□□ 0.46
CX3CL1P78423 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CX3CL1P78423 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CX3CL1P78423 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CX3CL1P78423 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CX3CL1P78423 ANOS2P-203ENST00000472227 1816 ntBASIC17.9■□□□□ 0.46
CX3CL1P78423 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CX3CL1P78423 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CX3CL1P78423 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CX3CL1P78423 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CX3CL1P78423 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
CX3CL1P78423 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CX3CL1P78423 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.89■□□□□ 0.45
CX3CL1P78423 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.89■□□□□ 0.45
CX3CL1P78423 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CX3CL1P78423 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CX3CL1P78423 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CX3CL1P78423 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CX3CL1P78423 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.89■□□□□ 0.45
CX3CL1P78423 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CX3CL1P78423 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CX3CL1P78423 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CX3CL1P78423 AL117328.2-201ENST00000624617 1940 ntBASIC17.88■□□□□ 0.45
CX3CL1P78423 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CX3CL1P78423 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CX3CL1P78423 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.88■□□□□ 0.45
CX3CL1P78423 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.88■□□□□ 0.45
CX3CL1P78423 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CX3CL1P78423 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.88■□□□□ 0.45
CX3CL1P78423 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CX3CL1P78423 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CX3CL1P78423 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CX3CL1P78423 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CX3CL1P78423 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CX3CL1P78423 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CX3CL1P78423 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CX3CL1P78423 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CX3CL1P78423 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CX3CL1P78423 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CX3CL1P78423 AL356441.2-201ENST00000443009 864 ntBASIC17.87■□□□□ 0.45
CX3CL1P78423 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.87■□□□□ 0.45
CX3CL1P78423 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.87■□□□□ 0.45
CX3CL1P78423 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.87■□□□□ 0.45
CX3CL1P78423 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CX3CL1P78423 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CX3CL1P78423 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CX3CL1P78423 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CX3CL1P78423 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CX3CL1P78423 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CX3CL1P78423 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.86■□□□□ 0.45
CX3CL1P78423 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CX3CL1P78423 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CX3CL1P78423 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CX3CL1P78423 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.86■□□□□ 0.45
CX3CL1P78423 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CX3CL1P78423 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CX3CL1P78423 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CX3CL1P78423 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CX3CL1P78423 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CX3CL1P78423 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CX3CL1P78423 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CX3CL1P78423 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CX3CL1P78423 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.85■□□□□ 0.45
CX3CL1P78423 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CX3CL1P78423 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CX3CL1P78423 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CX3CL1P78423 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CX3CL1P78423 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.85■□□□□ 0.45
CX3CL1P78423 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.85■□□□□ 0.45
CX3CL1P78423 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CX3CL1P78423 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.85■□□□□ 0.45
CX3CL1P78423 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.85■□□□□ 0.45
CX3CL1P78423 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.85■□□□□ 0.45
CX3CL1P78423 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CX3CL1P78423 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CX3CL1P78423 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CX3CL1P78423 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CX3CL1P78423 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.84■□□□□ 0.45
CX3CL1P78423 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CX3CL1P78423 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CX3CL1P78423 AC092068.2-201ENST00000590491 1708 ntBASIC17.84■□□□□ 0.45
CX3CL1P78423 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CX3CL1P78423 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CX3CL1P78423 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.84■□□□□ 0.45
CX3CL1P78423 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.84■□□□□ 0.45
CX3CL1P78423 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CX3CL1P78423 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.84■□□□□ 0.45
CX3CL1P78423 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CX3CL1P78423 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CX3CL1P78423 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CX3CL1P78423 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CX3CL1P78423 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CX3CL1P78423 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CX3CL1P78423 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CX3CL1P78423 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CX3CL1P78423 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CX3CL1P78423 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms