Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.35■□□□□ 0.85
CXCR4P61073 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CXCR4P61073 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.35■□□□□ 0.85
CXCR4P61073 AC018755.3-202ENST00000596210 929 ntBASIC20.35■□□□□ 0.85
CXCR4P61073 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CXCR4P61073 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CXCR4P61073 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CXCR4P61073 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CXCR4P61073 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR4P61073 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR4P61073 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR4P61073 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.34■□□□□ 0.85
CXCR4P61073 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.34■□□□□ 0.85
CXCR4P61073 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR4P61073 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CXCR4P61073 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR4P61073 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR4P61073 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR4P61073 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.33■□□□□ 0.85
CXCR4P61073 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CXCR4P61073 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CXCR4P61073 AC026310.3-201ENST00000625186 2373 ntBASIC20.33■□□□□ 0.85
CXCR4P61073 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CXCR4P61073 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
CXCR4P61073 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CXCR4P61073 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CXCR4P61073 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.33■□□□□ 0.84
CXCR4P61073 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CXCR4P61073 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
CXCR4P61073 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR4P61073 RNF126P1-201ENST00000567452 1320 ntBASIC20.32■□□□□ 0.84
CXCR4P61073 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CXCR4P61073 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR4P61073 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR4P61073 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR4P61073 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.32■□□□□ 0.84
CXCR4P61073 SPCS2P3-201ENST00000500401 656 ntBASIC20.32■□□□□ 0.84
CXCR4P61073 AL592293.1-201ENST00000502889 1188 ntBASIC20.32■□□□□ 0.84
CXCR4P61073 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CXCR4P61073 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CXCR4P61073 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR4P61073 AC079630.1-202ENST00000618127 1840 ntBASIC20.32■□□□□ 0.84
CXCR4P61073 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR4P61073 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR4P61073 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR4P61073 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.31■□□□□ 0.84
CXCR4P61073 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CXCR4P61073 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CXCR4P61073 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CXCR4P61073 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CXCR4P61073 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXCR4P61073 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.3■□□□□ 0.84
CXCR4P61073 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CXCR4P61073 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXCR4P61073 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXCR4P61073 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXCR4P61073 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXCR4P61073 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.3■□□□□ 0.84
CXCR4P61073 AL592295.1-201ENST00000400984 884 ntBASIC20.3■□□□□ 0.84
CXCR4P61073 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.3■□□□□ 0.84
CXCR4P61073 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.3■□□□□ 0.84
CXCR4P61073 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXCR4P61073 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXCR4P61073 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.3■□□□□ 0.84
CXCR4P61073 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CXCR4P61073 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXCR4P61073 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CXCR4P61073 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXCR4P61073 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CXCR4P61073 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CXCR4P61073 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.29■□□□□ 0.84
CXCR4P61073 AC080038.3-201ENST00000623346 1952 ntBASIC20.29■□□□□ 0.84
CXCR4P61073 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CXCR4P61073 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.29■□□□□ 0.84
CXCR4P61073 AC087393.1-201ENST00000582896 145 ntBASIC20.29■□□□□ 0.84
CXCR4P61073 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CXCR4P61073 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.29■□□□□ 0.84
CXCR4P61073 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CXCR4P61073 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.29■□□□□ 0.84
CXCR4P61073 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CXCR4P61073 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CXCR4P61073 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CXCR4P61073 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.28■□□□□ 0.84
CXCR4P61073 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CXCR4P61073 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CXCR4P61073 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CXCR4P61073 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.28■□□□□ 0.84
CXCR4P61073 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CXCR4P61073 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CXCR4P61073 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CXCR4P61073 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.28■□□□□ 0.84
CXCR4P61073 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
CXCR4P61073 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
CXCR4P61073 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CXCR4P61073 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CXCR4P61073 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CXCR4P61073 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CXCR4P61073 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CXCR4P61073 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CXCR4P61073 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms