Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DUSP8P4-201ENST00000399538 1761 ntBASIC21.53■■□□□ 1.04
CLDN6P56747 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
CLDN6P56747 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.53■■□□□ 1.04
CLDN6P56747 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN6P56747 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.53■■□□□ 1.04
CLDN6P56747 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN6P56747 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN6P56747 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN6P56747 LINC02228-203ENST00000641970 1355 ntBASIC21.53■■□□□ 1.04
CLDN6P56747 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CLDN6P56747 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CLDN6P56747 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CLDN6P56747 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.53■■□□□ 1.04
CLDN6P56747 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.53■■□□□ 1.04
CLDN6P56747 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CLDN6P56747 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.53■■□□□ 1.04
CLDN6P56747 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CLDN6P56747 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CLDN6P56747 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CLDN6P56747 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.52■■□□□ 1.04
CLDN6P56747 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.52■■□□□ 1.04
CLDN6P56747 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CLDN6P56747 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.52■■□□□ 1.04
CLDN6P56747 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.52■■□□□ 1.04
CLDN6P56747 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CLDN6P56747 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CLDN6P56747 AC145676.1-201ENST00000514988 2004 ntBASIC21.51■■□□□ 1.03
CLDN6P56747 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN6P56747 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CLDN6P56747 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN6P56747 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.51■■□□□ 1.03
CLDN6P56747 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN6P56747 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN6P56747 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN6P56747 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.51■■□□□ 1.03
CLDN6P56747 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN6P56747 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.51■■□□□ 1.03
CLDN6P56747 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.51■■□□□ 1.03
CLDN6P56747 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN6P56747 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.51■■□□□ 1.03
CLDN6P56747 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.51■■□□□ 1.03
CLDN6P56747 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CLDN6P56747 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN6P56747 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN6P56747 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CLDN6P56747 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN6P56747 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN6P56747 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN6P56747 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN6P56747 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN6P56747 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN6P56747 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.5■■□□□ 1.03
CLDN6P56747 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CLDN6P56747 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN6P56747 AC080038.1-201ENST00000611274 1154 ntBASIC21.5■■□□□ 1.03
CLDN6P56747 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN6P56747 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CLDN6P56747 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.5■■□□□ 1.03
CLDN6P56747 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CLDN6P56747 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN6P56747 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CLDN6P56747 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN6P56747 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN6P56747 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN6P56747 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.49■■□□□ 1.03
CLDN6P56747 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.49■■□□□ 1.03
CLDN6P56747 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.49■■□□□ 1.03
CLDN6P56747 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.49■■□□□ 1.03
CLDN6P56747 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN6P56747 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.49■■□□□ 1.03
CLDN6P56747 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN6P56747 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.49■■□□□ 1.03
CLDN6P56747 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CLDN6P56747 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.49■■□□□ 1.03
CLDN6P56747 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN6P56747 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CLDN6P56747 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.48■■□□□ 1.03
CLDN6P56747 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
CLDN6P56747 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN6P56747 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.48■■□□□ 1.03
CLDN6P56747 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CLDN6P56747 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN6P56747 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.47■■□□□ 1.03
CLDN6P56747 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.47■■□□□ 1.03
CLDN6P56747 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN6P56747 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.47■■□□□ 1.03
CLDN6P56747 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN6P56747 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.47■■□□□ 1.03
CLDN6P56747 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CLDN6P56747 AP005435.1-201ENST00000529293 1178 ntBASIC21.47■■□□□ 1.03
CLDN6P56747 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.47■■□□□ 1.03
CLDN6P56747 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.47■■□□□ 1.03
CLDN6P56747 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN6P56747 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN6P56747 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN6P56747 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.46■■□□□ 1.03
CLDN6P56747 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CLDN6P56747 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.46■■□□□ 1.03
CLDN6P56747 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.46■■□□□ 1.03
CLDN6P56747 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms