Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 MDM12YOL009C 816 nt4.27□□□□□ -1.73
YNL040WP53960 DSS4YPR017C 432 nt4.27□□□□□ -1.73
YNL040WP53960 YDR246W-AYDR246W-A 201 nt4.26□□□□□ -1.73
YNL040WP53960 RPS4BYHR203C 786 nt4.26□□□□□ -1.73
YNL040WP53960 RPS4AYJR145C 786 nt4.26□□□□□ -1.73
YNL040WP53960 PAU17YLL025W 375 nt4.26□□□□□ -1.73
YNL040WP53960 PHA2YNL316C 1005 nt4.26□□□□□ -1.73
YNL040WP53960 SPN1YPR133C 1233 nt4.26□□□□□ -1.73
YNL040WP53960 PTA1YAL043C 2358 nt4.26□□□□□ -1.73
YNL040WP53960 FLC1YPL221W 2382 nt4.26□□□□□ -1.73
YNL040WP53960 ARG4YHR018C 1392 nt4.26□□□□□ -1.73
YNL040WP53960 GSH2YOL049W 1476 nt4.25□□□□□ -1.73
YNL040WP53960 YDL094CYDL094C 510 nt4.25□□□□□ -1.73
YNL040WP53960 RPS11AYDR025W 471 nt4.25□□□□□ -1.73
YNL040WP53960 HSP42YDR171W 1128 nt4.25□□□□□ -1.73
YNL040WP53960 YFT2YDR319C 825 nt4.25□□□□□ -1.73
YNL040WP53960 MIC26YGR235C 702 nt4.25□□□□□ -1.73
YNL040WP53960 GWT1YJL091C 1473 nt4.24□□□□□ -1.73
YNL040WP53960 GPI18YBR004C 1302 nt4.24□□□□□ -1.73
YNL040WP53960 FAS2YPL231W 5664 nt4.24□□□□□ -1.73
YNL040WP53960 SSB1YDL229W 1842 nt4.24□□□□□ -1.73
YNL040WP53960 PMT5YDL093W 2232 nt4.24□□□□□ -1.73
YNL040WP53960 YDL124WYDL124W 939 nt4.24□□□□□ -1.73
YNL040WP53960 YDR133CYDR133C 336 nt4.24□□□□□ -1.73
YNL040WP53960 MRPL3YMR024W 1173 nt4.24□□□□□ -1.73
YNL040WP53960 ROT1YMR200W 771 nt4.24□□□□□ -1.73
YNL040WP53960 RPC19YNL113W 429 nt4.24□□□□□ -1.73
YNL040WP53960 YOL035CYOL035C 303 nt4.24□□□□□ -1.73
YNL040WP53960 RPS19AYOL121C 435 nt4.24□□□□□ -1.73
YNL040WP53960 TIP41YPR040W 1071 nt4.24□□□□□ -1.73
YNL040WP53960 GDT1YBR187W 843 nt4.24□□□□□ -1.73
YNL040WP53960 SRP72YPL210C 1923 nt4.24□□□□□ -1.73
YNL040WP53960 IBA57YJR122W 1494 nt4.24□□□□□ -1.73
YNL040WP53960 NHX1YDR456W 1902 nt4.23□□□□□ -1.73
YNL040WP53960 RSA3YLR221C 663 nt4.23□□□□□ -1.73
YNL040WP53960 YMR086C-AYMR086C-A 339 nt4.23□□□□□ -1.73
YNL040WP53960 YMR315WYMR315W 1050 nt4.23□□□□□ -1.73
YNL040WP53960 EFM2YBR271W 1260 nt4.23□□□□□ -1.73
YNL040WP53960 SMP1YBR182C 1359 nt4.23□□□□□ -1.73
YNL040WP53960 LEU1YGL009C 2340 nt4.22□□□□□ -1.73
YNL040WP53960 MMT1YMR177W 1533 nt4.22□□□□□ -1.73
YNL040WP53960 YBR139WYBR139W 1527 nt4.22□□□□□ -1.73
YNL040WP53960 ELO2YCR034W 1044 nt4.22□□□□□ -1.73
YNL040WP53960 TMA17YDL110C 453 nt4.22□□□□□ -1.73
YNL040WP53960 YDL228CYDL228C 642 nt4.22□□□□□ -1.73
YNL040WP53960 UBC8YEL012W 657 nt4.22□□□□□ -1.73
YNL040WP53960 PIC2YER053C 903 nt4.22□□□□□ -1.73
YNL040WP53960 YJR038CYJR038C 363 nt4.22□□□□□ -1.73
YNL040WP53960 YKL169CYKL169C 384 nt4.22□□□□□ -1.73
YNL040WP53960 IMP2YMR035W 534 nt4.22□□□□□ -1.73
YNL040WP53960 ARO7YPR060C 771 nt4.22□□□□□ -1.73
YNL040WP53960 STP22YCL008C 1158 nt4.22□□□□□ -1.73
YNL040WP53960 TPO2YGR138C 1845 nt4.22□□□□□ -1.73
YNL040WP53960 ULS1YOR191W 4860 nt4.22□□□□□ -1.73
YNL040WP53960 TIP20YGL145W 2106 nt4.22□□□□□ -1.73
YNL040WP53960 IXR1YKL032C 1794 nt4.22□□□□□ -1.73
YNL040WP53960 ARC1YGL105W 1131 nt4.21□□□□□ -1.74
YNL040WP53960 PER33YLR064W 822 nt4.21□□□□□ -1.74
YNL040WP53960 RFU1YLR073C 603 nt4.21□□□□□ -1.74
YNL040WP53960 YNL181WYNL181W 1224 nt4.21□□□□□ -1.74
YNL040WP53960 FSH3YOR280C 801 nt4.21□□□□□ -1.74
YNL040WP53960 snR3snR3 194 nt4.21□□□□□ -1.74
YNL040WP53960 MDM34YGL219C 1380 nt4.21□□□□□ -1.74
YNL040WP53960 ARH1YDR376W 1482 nt4.21□□□□□ -1.74
YNL040WP53960 CDC14YFR028C 1656 nt4.21□□□□□ -1.74
YNL040WP53960 ECM32YER176W 3366 nt4.21□□□□□ -1.74
YNL040WP53960 NCR1YPL006W 3513 nt4.21□□□□□ -1.74
YNL040WP53960 ECM22YLR228C 2445 nt4.21□□□□□ -1.74
YNL040WP53960 SSA2YLL024C 1920 nt4.21□□□□□ -1.74
YNL040WP53960 DIT1YDR403W 1611 nt4.21□□□□□ -1.74
YNL040WP53960 HSP30YCR021C 999 nt4.2□□□□□ -1.74
YNL040WP53960 SPC19YDR201W 498 nt4.2□□□□□ -1.74
YNL040WP53960 CAF16YFL028C 870 nt4.2□□□□□ -1.74
YNL040WP53960 tL(UAG)JtL(UAG)J 82 nt4.2□□□□□ -1.74
YNL040WP53960 tL(UAG)L1tL(UAG)L1 82 nt4.2□□□□□ -1.74
YNL040WP53960 tL(UAG)L2tL(UAG)L2 82 nt4.2□□□□□ -1.74
YNL040WP53960 FMP48YGR052W 1110 nt4.2□□□□□ -1.74
YNL040WP53960 LSB1YGR136W 726 nt4.2□□□□□ -1.74
YNL040WP53960 YMR085WYMR085W 1299 nt4.2□□□□□ -1.74
YNL040WP53960 ASC1YMR116C 960 nt4.2□□□□□ -1.74
YNL040WP53960 HFA1YMR207C 6372 nt4.2□□□□□ -1.74
YNL040WP53960 SIW14YNL032W 846 nt4.2□□□□□ -1.74
YNL040WP53960 YDL109CYDL109C 1944 nt4.2□□□□□ -1.74
YNL040WP53960 OMS1YDR316W 1416 nt4.2□□□□□ -1.74
YNL040WP53960 NBP2YDR162C 711 nt4.19□□□□□ -1.74
YNL040WP53960 SNM1YDR478W 597 nt4.19□□□□□ -1.74
YNL040WP53960 YGR011WYGR011W 327 nt4.19□□□□□ -1.74
YNL040WP53960 MAL13YGR288W 1422 nt4.19□□□□□ -1.74
YNL040WP53960 MET17YLR303W 1335 nt4.19□□□□□ -1.74
YNL040WP53960 RCM1YNL022C 1473 nt4.18□□□□□ -1.74
YNL040WP53960 TGL4YKR089C 2733 nt4.18□□□□□ -1.74
YNL040WP53960 HPM1YIL110W 1134 nt4.18□□□□□ -1.74
YNL040WP53960 SPC42YKL042W 1092 nt4.18□□□□□ -1.74
YNL040WP53960 YML116W-AYML116W-A 303 nt4.18□□□□□ -1.74
YNL040WP53960 YMR130WYMR130W 909 nt4.18□□□□□ -1.74
YNL040WP53960 ATG2YNL242W 4779 nt4.18□□□□□ -1.74
YNL040WP53960 SEC2YNL272C 2280 nt4.18□□□□□ -1.74
YNL040WP53960 GSM1YJL103C 1857 nt4.18□□□□□ -1.74
YNL040WP53960 SIR2YDL042C 1689 nt4.17□□□□□ -1.74
YNL040WP53960 YBL059WYBL059W 582 nt4.17□□□□□ -1.74
Retrieved 100 of 7,029 protein–RNA pairs in 59.7 ms