Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRP9P49458 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRP9P49458 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.68■□□□□ 0.74
SRP9P49458 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRP9P49458 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRP9P49458 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRP9P49458 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SRP9P49458 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRP9P49458 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SRP9P49458 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRP9P49458 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRP9P49458 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.67■□□□□ 0.74
SRP9P49458 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SRP9P49458 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRP9P49458 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SRP9P49458 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.67■□□□□ 0.74
SRP9P49458 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.67■□□□□ 0.74
SRP9P49458 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRP9P49458 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SRP9P49458 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SRP9P49458 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRP9P49458 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRP9P49458 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SRP9P49458 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.66■□□□□ 0.74
SRP9P49458 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SRP9P49458 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.66■□□□□ 0.74
SRP9P49458 AL035685.1-201ENST00000636663 812 ntBASIC19.66■□□□□ 0.74
SRP9P49458 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRP9P49458 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRP9P49458 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRP9P49458 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SRP9P49458 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SRP9P49458 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SRP9P49458 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.66■□□□□ 0.74
SRP9P49458 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SRP9P49458 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
SRP9P49458 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRP9P49458 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.65■□□□□ 0.74
SRP9P49458 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRP9P49458 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SRP9P49458 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SRP9P49458 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRP9P49458 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRP9P49458 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.65■□□□□ 0.74
SRP9P49458 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRP9P49458 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SRP9P49458 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRP9P49458 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SRP9P49458 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SRP9P49458 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SRP9P49458 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SRP9P49458 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.64■□□□□ 0.73
SRP9P49458 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.64■□□□□ 0.73
SRP9P49458 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRP9P49458 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRP9P49458 AF131216.4-201ENST00000638924 1588 ntBASIC19.64■□□□□ 0.73
SRP9P49458 AC092068.2-201ENST00000590491 1708 ntBASIC19.64■□□□□ 0.73
SRP9P49458 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SRP9P49458 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRP9P49458 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRP9P49458 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRP9P49458 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.63■□□□□ 0.73
SRP9P49458 AC239859.2-201ENST00000444165 318 ntBASIC19.63■□□□□ 0.73
SRP9P49458 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.63■□□□□ 0.73
SRP9P49458 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SRP9P49458 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.63■□□□□ 0.73
SRP9P49458 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.63■□□□□ 0.73
SRP9P49458 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.63■□□□□ 0.73
SRP9P49458 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SRP9P49458 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SRP9P49458 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.62■□□□□ 0.73
SRP9P49458 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SRP9P49458 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRP9P49458 SLC25A24-204ENST00000569674 2357 ntBASIC19.62■□□□□ 0.73
SRP9P49458 AC021242.3-201ENST00000607598 1377 ntBASIC19.62■□□□□ 0.73
SRP9P49458 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SRP9P49458 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SRP9P49458 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SRP9P49458 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.62■□□□□ 0.73
SRP9P49458 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.62■□□□□ 0.73
SRP9P49458 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.62■□□□□ 0.73
SRP9P49458 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRP9P49458 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SRP9P49458 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.62■□□□□ 0.73
SRP9P49458 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.62■□□□□ 0.73
SRP9P49458 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SRP9P49458 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRP9P49458 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SRP9P49458 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SRP9P49458 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.61■□□□□ 0.73
SRP9P49458 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SRP9P49458 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRP9P49458 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SRP9P49458 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SRP9P49458 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SRP9P49458 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRP9P49458 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRP9P49458 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SRP9P49458 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRP9P49458 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms