Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 FDH2YPL275W 711 nt5.55□□□□□ -1.52
TY1B-JR1P47098 PTM1YKL039W 1572 nt5.54□□□□□ -1.52
TY1B-JR1P47098 ADP1YCR011C 3150 nt5.54□□□□□ -1.52
TY1B-JR1P47098 RNR1YER070W 2667 nt5.54□□□□□ -1.52
TY1B-JR1P47098 DTD1YDL219W 453 nt5.54□□□□□ -1.52
TY1B-JR1P47098 YLR012CYLR012C 300 nt5.54□□□□□ -1.52
TY1B-JR1P47098 DSF2YBR007C 2211 nt5.54□□□□□ -1.52
TY1B-JR1P47098 FLC3YGL139W 2409 nt5.53□□□□□ -1.52
TY1B-JR1P47098 TFC6YDR362C 2019 nt5.53□□□□□ -1.52
TY1B-JR1P47098 SUB2YDL084W 1341 nt5.53□□□□□ -1.52
TY1B-JR1P47098 ACE2YLR131C 2313 nt5.53□□□□□ -1.52
TY1B-JR1P47098 FLO5YHR211W 3228 nt5.53□□□□□ -1.52
TY1B-JR1P47098 FAA1YOR317W 2103 nt5.53□□□□□ -1.52
TY1B-JR1P47098 YEL057CYEL057C 702 nt5.52□□□□□ -1.53
TY1B-JR1P47098 IRC25YLR021W 540 nt5.52□□□□□ -1.53
TY1B-JR1P47098 RPA43YOR340C 981 nt5.52□□□□□ -1.53
TY1B-JR1P47098 MSC7YHR039C 1935 nt5.52□□□□□ -1.53
TY1B-JR1P47098 JIP4YDR475C 2631 nt5.52□□□□□ -1.53
TY1B-JR1P47098 IDS2YJL146W 1410 nt5.52□□□□□ -1.53
TY1B-JR1P47098 YPL216WYPL216W 3309 nt5.52□□□□□ -1.53
TY1B-JR1P47098 KAP114YGL241W 3015 nt5.52□□□□□ -1.53
TY1B-JR1P47098 YNL095CYNL095C 1929 nt5.52□□□□□ -1.53
TY1B-JR1P47098 GAL4YPL248C 2646 nt5.52□□□□□ -1.53
TY1B-JR1P47098 MSD1YPL104W 1977 nt5.51□□□□□ -1.53
TY1B-JR1P47098 RPN2YIL075C 2838 nt5.51□□□□□ -1.53
TY1B-JR1P47098 ACK1YDL203C 1872 nt5.5□□□□□ -1.53
TY1B-JR1P47098 YDL094CYDL094C 510 nt5.5□□□□□ -1.53
TY1B-JR1P47098 PDR16YNL231C 1056 nt5.5□□□□□ -1.53
TY1B-JR1P47098 TMA19YKL056C 504 nt5.5□□□□□ -1.53
TY1B-JR1P47098 SIP5YMR140W 1470 nt5.49□□□□□ -1.53
TY1B-JR1P47098 GTF1YGR102C 552 nt5.49□□□□□ -1.53
TY1B-JR1P47098 SNF2YOR290C 5112 nt5.49□□□□□ -1.53
TY1B-JR1P47098 PEX19YDL065C 1029 nt5.48□□□□□ -1.53
TY1B-JR1P47098 CWC27YPL064C 906 nt5.48□□□□□ -1.53
TY1B-JR1P47098 CKS1YBR135W 453 nt5.48□□□□□ -1.53
TY1B-JR1P47098 RSC1YGR056W 2787 nt5.48□□□□□ -1.53
TY1B-JR1P47098 MKK1YOR231W 1527 nt5.48□□□□□ -1.53
TY1B-JR1P47098 SVF1YDR346C 1446 nt5.47□□□□□ -1.53
TY1B-JR1P47098 TEF4YKL081W 1239 nt5.47□□□□□ -1.53
TY1B-JR1P47098 PEX29YDR479C 1665 nt5.46□□□□□ -1.54
TY1B-JR1P47098 PHO86YJL117W 936 nt5.46□□□□□ -1.54
TY1B-JR1P47098 YPP1YGR198W 2454 nt5.46□□□□□ -1.54
TY1B-JR1P47098 OAF1YAL051W 3144 nt5.46□□□□□ -1.54
TY1B-JR1P47098 SRP101YDR292C 1866 nt5.46□□□□□ -1.54
TY1B-JR1P47098 EIS1YMR031C 2532 nt5.46□□□□□ -1.54
TY1B-JR1P47098 HIM1YDR317W 1245 nt5.45□□□□□ -1.54
TY1B-JR1P47098 ADD66YKL206C 804 nt5.45□□□□□ -1.54
TY1B-JR1P47098 BUD14YAR014C 2130 nt5.45□□□□□ -1.54
TY1B-JR1P47098 YCL021W-AYCL021W-A 378 nt5.45□□□□□ -1.54
TY1B-JR1P47098 PKH1YDR490C 2301 nt5.45□□□□□ -1.54
TY1B-JR1P47098 MAP1YLR244C 1164 nt5.44□□□□□ -1.54
TY1B-JR1P47098 CYK3YDL117W 2658 nt5.44□□□□□ -1.54
TY1B-JR1P47098 YCF1YDR135C 4548 nt5.44□□□□□ -1.54
TY1B-JR1P47098 SHQ1YIL104C 1524 nt5.44□□□□□ -1.54
TY1B-JR1P47098 YFR035CYFR035C 345 nt5.44□□□□□ -1.54
TY1B-JR1P47098 TCB3YML072C 4638 nt5.43□□□□□ -1.54
TY1B-JR1P47098 TDA7YNL176C 1911 nt5.43□□□□□ -1.54
TY1B-JR1P47098 ARN2YHL047C 1863 nt5.43□□□□□ -1.54
TY1B-JR1P47098 TRX3YCR083W 384 nt5.43□□□□□ -1.54
TY1B-JR1P47098 SYT1YPR095C 3681 nt5.43□□□□□ -1.54
TY1B-JR1P47098 OCA5YHL029C 2040 nt5.43□□□□□ -1.54
TY1B-JR1P47098 YGL218WYGL218W 651 nt5.42□□□□□ -1.54
TY1B-JR1P47098 RPL15AYLR029C 615 nt5.42□□□□□ -1.54
TY1B-JR1P47098 SIT1YEL065W 1887 nt5.42□□□□□ -1.54
TY1B-JR1P47098 PTA1YAL043C 2358 nt5.42□□□□□ -1.54
TY1B-JR1P47098 VPS73YGL104C 1461 nt5.42□□□□□ -1.54
TY1B-JR1P47098 RRP17YDR412W 708 nt5.42□□□□□ -1.54
TY1B-JR1P47098 PWR1PWR1 941 nt5.42□□□□□ -1.54
TY1B-JR1P47098 MDM1YML104C 3384 nt5.41□□□□□ -1.54
TY1B-JR1P47098 ALR2YFL050C 2577 nt5.41□□□□□ -1.54
TY1B-JR1P47098 NSA2YER126C 786 nt5.41□□□□□ -1.54
TY1B-JR1P47098 tV(CAC)DtV(CAC)D 73 nt5.41□□□□□ -1.54
TY1B-JR1P47098 tV(CAC)HtV(CAC)H 73 nt5.41□□□□□ -1.54
TY1B-JR1P47098 POL3YDL102W 3294 nt5.4□□□□□ -1.54
TY1B-JR1P47098 NPY1YGL067W 1155 nt5.4□□□□□ -1.54
TY1B-JR1P47098 HGH1YGR187C 1185 nt5.4□□□□□ -1.54
TY1B-JR1P47098 RPB3YIL021W 957 nt5.4□□□□□ -1.54
TY1B-JR1P47098 VAC8YEL013W 1737 nt5.4□□□□□ -1.55
TY1B-JR1P47098 YTM1YOR272W 1383 nt5.4□□□□□ -1.55
TY1B-JR1P47098 MRPL51YPR100W 423 nt5.39□□□□□ -1.55
TY1B-JR1P47098 SLI1YGR212W 1407 nt5.39□□□□□ -1.55
TY1B-JR1P47098 APC1YNL172W 5247 nt5.38□□□□□ -1.55
TY1B-JR1P47098 ERJ5YFR041C 888 nt5.38□□□□□ -1.55
TY1B-JR1P47098 YNR063WYNR063W 1824 nt5.38□□□□□ -1.55
TY1B-JR1P47098 APE1YKL103C 1545 nt5.37□□□□□ -1.55
TY1B-JR1P47098 AKR1YDR264C 2295 nt5.37□□□□□ -1.55
TY1B-JR1P47098 ARC15YIL062C 465 nt5.37□□□□□ -1.55
TY1B-JR1P47098 CPR6YLR216C 1116 nt5.37□□□□□ -1.55
TY1B-JR1P47098 YMR316C-AYMR316C-A 312 nt5.37□□□□□ -1.55
TY1B-JR1P47098 DIP2YLR129W 2832 nt5.37□□□□□ -1.55
TY1B-JR1P47098 IRS4YKR019C 1848 nt5.37□□□□□ -1.55
TY1B-JR1P47098 UBX5YDR330W 1503 nt5.37□□□□□ -1.55
TY1B-JR1P47098 YCL075WYCL075W 441 nt5.37□□□□□ -1.55
TY1B-JR1P47098 MDY2YOL111C 639 nt5.37□□□□□ -1.55
TY1B-JR1P47098 YHR180WYHR180W 492 nt5.36□□□□□ -1.55
TY1B-JR1P47098 PFA4YOL003C 1137 nt5.36□□□□□ -1.55
TY1B-JR1P47098 ECM21YBL101C 3354 nt5.36□□□□□ -1.55
TY1B-JR1P47098 CDS1YBR029C 1374 nt5.36□□□□□ -1.55
TY1B-JR1P47098 YGR107WYGR107W 450 nt5.35□□□□□ -1.55
TY1B-JR1P47098 CDC8YJR057W 651 nt5.35□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 21.1 ms