Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATRXP46100 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.68■□□□□ 0.9
ATRXP46100 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ATRXP46100 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.68■□□□□ 0.9
ATRXP46100 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
ATRXP46100 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATRXP46100 AL445228.2-201ENST00000605589 952 ntBASIC20.68■□□□□ 0.9
ATRXP46100 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATRXP46100 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.67■□□□□ 0.9
ATRXP46100 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATRXP46100 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ATRXP46100 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATRXP46100 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.67■□□□□ 0.9
ATRXP46100 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ATRXP46100 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.67■□□□□ 0.9
ATRXP46100 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.66■□□□□ 0.9
ATRXP46100 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.66■□□□□ 0.9
ATRXP46100 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ATRXP46100 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ATRXP46100 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
ATRXP46100 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.66■□□□□ 0.9
ATRXP46100 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRXP46100 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATRXP46100 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATRXP46100 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.65■□□□□ 0.9
ATRXP46100 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATRXP46100 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
ATRXP46100 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ATRXP46100 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.65■□□□□ 0.9
ATRXP46100 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATRXP46100 AC008550.1-201ENST00000511500 884 ntBASIC20.65■□□□□ 0.9
ATRXP46100 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATRXP46100 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
ATRXP46100 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ATRXP46100 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
ATRXP46100 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
ATRXP46100 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.64■□□□□ 0.9
ATRXP46100 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.64■□□□□ 0.9
ATRXP46100 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.64■□□□□ 0.89
ATRXP46100 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
ATRXP46100 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.64■□□□□ 0.89
ATRXP46100 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
ATRXP46100 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.64■□□□□ 0.89
ATRXP46100 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ATRXP46100 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.64■□□□□ 0.89
ATRXP46100 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATRXP46100 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.63■□□□□ 0.89
ATRXP46100 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATRXP46100 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ATRXP46100 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATRXP46100 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ATRXP46100 AL050303.2-201ENST00000619798 666 ntBASIC20.63■□□□□ 0.89
ATRXP46100 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
ATRXP46100 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ATRXP46100 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.62■□□□□ 0.89
ATRXP46100 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.62■□□□□ 0.89
ATRXP46100 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATRXP46100 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.62■□□□□ 0.89
ATRXP46100 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATRXP46100 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATRXP46100 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATRXP46100 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
ATRXP46100 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.61■□□□□ 0.89
ATRXP46100 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ATRXP46100 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ATRXP46100 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATRXP46100 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.61■□□□□ 0.89
ATRXP46100 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATRXP46100 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATRXP46100 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.61■□□□□ 0.89
ATRXP46100 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ATRXP46100 SLC7A5P2-201ENST00000553010 536 ntBASIC20.61■□□□□ 0.89
ATRXP46100 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATRXP46100 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.6■□□□□ 0.89
ATRXP46100 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.6■□□□□ 0.89
ATRXP46100 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.6■□□□□ 0.89
ATRXP46100 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATRXP46100 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATRXP46100 AC098934.4-201ENST00000564127 592 ntBASIC20.6■□□□□ 0.89
ATRXP46100 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATRXP46100 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.6■□□□□ 0.89
ATRXP46100 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ATRXP46100 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATRXP46100 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATRXP46100 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATRXP46100 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATRXP46100 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATRXP46100 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.6■□□□□ 0.89
ATRXP46100 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATRXP46100 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATRXP46100 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATRXP46100 LINC01023-201ENST00000606054 436 ntBASIC20.6■□□□□ 0.89
ATRXP46100 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATRXP46100 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.59■□□□□ 0.89
ATRXP46100 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATRXP46100 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATRXP46100 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATRXP46100 AL158047.1-201ENST00000445918 881 ntBASIC20.59■□□□□ 0.89
ATRXP46100 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.59■□□□□ 0.89
ATRXP46100 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms