Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.12■□□□□ 0.65
CBX5P45973 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.12■□□□□ 0.65
CBX5P45973 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX5P45973 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX5P45973 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CBX5P45973 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
CBX5P45973 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CBX5P45973 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX5P45973 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX5P45973 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CBX5P45973 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX5P45973 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX5P45973 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.11■□□□□ 0.65
CBX5P45973 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.11■□□□□ 0.65
CBX5P45973 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX5P45973 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CBX5P45973 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CBX5P45973 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CBX5P45973 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBX5P45973 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBX5P45973 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBX5P45973 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.1■□□□□ 0.65
CBX5P45973 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBX5P45973 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CBX5P45973 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CBX5P45973 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBX5P45973 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CBX5P45973 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.1■□□□□ 0.65
CBX5P45973 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX5P45973 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CBX5P45973 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX5P45973 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CBX5P45973 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.09■□□□□ 0.65
CBX5P45973 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CBX5P45973 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CBX5P45973 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CBX5P45973 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX5P45973 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX5P45973 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX5P45973 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX5P45973 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX5P45973 AC242852.2-201ENST00000615738 1807 ntBASIC19.09■□□□□ 0.65
CBX5P45973 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX5P45973 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX5P45973 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CBX5P45973 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CBX5P45973 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CBX5P45973 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CBX5P45973 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.08■□□□□ 0.64
CBX5P45973 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CBX5P45973 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CBX5P45973 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CBX5P45973 ALDH1A3-203ENST00000557963 1670 ntBASIC19.08■□□□□ 0.64
CBX5P45973 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
CBX5P45973 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX5P45973 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CBX5P45973 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX5P45973 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.07■□□□□ 0.64
CBX5P45973 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CBX5P45973 AC018755.3-202ENST00000596210 929 ntBASIC19.07■□□□□ 0.64
CBX5P45973 AC133552.2-201ENST00000619106 1032 ntBASIC19.07■□□□□ 0.64
CBX5P45973 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.07■□□□□ 0.64
CBX5P45973 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX5P45973 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.07■□□□□ 0.64
CBX5P45973 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX5P45973 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX5P45973 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CBX5P45973 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CBX5P45973 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX5P45973 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CBX5P45973 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CBX5P45973 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CBX5P45973 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX5P45973 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.06■□□□□ 0.64
CBX5P45973 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX5P45973 AC009831.1-201ENST00000580420 1582 ntBASIC19.06■□□□□ 0.64
CBX5P45973 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX5P45973 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CBX5P45973 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CBX5P45973 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.06■□□□□ 0.64
CBX5P45973 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX5P45973 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CBX5P45973 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX5P45973 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX5P45973 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX5P45973 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.06■□□□□ 0.64
CBX5P45973 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.06■□□□□ 0.64
CBX5P45973 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX5P45973 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX5P45973 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX5P45973 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.06■□□□□ 0.64
CBX5P45973 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CBX5P45973 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.05■□□□□ 0.64
CBX5P45973 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.05■□□□□ 0.64
CBX5P45973 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CBX5P45973 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX5P45973 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX5P45973 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX5P45973 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CBX5P45973 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms