Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
KRT20P35900 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
KRT20P35900 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT20P35900 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
KRT20P35900 GUSBP5-201ENST00000418136 578 ntBASIC21.08■□□□□ 0.97
KRT20P35900 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
KRT20P35900 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
KRT20P35900 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
KRT20P35900 ALDH1A3-203ENST00000557963 1670 ntBASIC21.08■□□□□ 0.96
KRT20P35900 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.08■□□□□ 0.96
KRT20P35900 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.08■□□□□ 0.96
KRT20P35900 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
KRT20P35900 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT20P35900 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
KRT20P35900 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT20P35900 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.07■□□□□ 0.96
KRT20P35900 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
KRT20P35900 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
KRT20P35900 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT20P35900 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
KRT20P35900 KRT16P3-201ENST00000439127 1283 ntBASIC21.07■□□□□ 0.96
KRT20P35900 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
KRT20P35900 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
KRT20P35900 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT20P35900 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT20P35900 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.06■□□□□ 0.96
KRT20P35900 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT20P35900 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT20P35900 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT20P35900 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT20P35900 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT20P35900 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.06■□□□□ 0.96
KRT20P35900 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.06■□□□□ 0.96
KRT20P35900 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT20P35900 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.06■□□□□ 0.96
KRT20P35900 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT20P35900 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT20P35900 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT20P35900 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT20P35900 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT20P35900 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT20P35900 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.05■□□□□ 0.96
KRT20P35900 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.05■□□□□ 0.96
KRT20P35900 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT20P35900 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT20P35900 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT20P35900 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.05■□□□□ 0.96
KRT20P35900 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.05■□□□□ 0.96
KRT20P35900 AC005703.6-201ENST00000623265 1329 ntBASIC21.04■□□□□ 0.96
KRT20P35900 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT20P35900 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT20P35900 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT20P35900 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
KRT20P35900 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
KRT20P35900 UNC93B8-201ENST00000511903 705 ntBASIC21.04■□□□□ 0.96
KRT20P35900 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
KRT20P35900 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT20P35900 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
KRT20P35900 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT20P35900 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT20P35900 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT20P35900 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT20P35900 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT20P35900 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
KRT20P35900 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT20P35900 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KRT20P35900 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT20P35900 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.03■□□□□ 0.96
KRT20P35900 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.03■□□□□ 0.96
KRT20P35900 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KRT20P35900 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.03■□□□□ 0.96
KRT20P35900 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
KRT20P35900 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT20P35900 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT20P35900 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT20P35900 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT20P35900 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT20P35900 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT20P35900 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT20P35900 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT20P35900 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT20P35900 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT20P35900 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KRT20P35900 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT20P35900 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
KRT20P35900 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT20P35900 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT20P35900 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT20P35900 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT20P35900 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT20P35900 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT20P35900 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT20P35900 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.01■□□□□ 0.95
KRT20P35900 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
KRT20P35900 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
KRT20P35900 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
KRT20P35900 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT20P35900 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.01■□□□□ 0.95
KRT20P35900 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.01■□□□□ 0.95
KRT20P35900 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms