Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA3P29320 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA3P29320 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA3P29320 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA3P29320 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA3P29320 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA3P29320 RARRES2P2-201ENST00000394842 485 ntBASIC21.7■■□□□ 1.06
EPHA3P29320 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.7■■□□□ 1.06
EPHA3P29320 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
EPHA3P29320 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA3P29320 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
EPHA3P29320 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA3P29320 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA3P29320 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA3P29320 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.69■■□□□ 1.06
EPHA3P29320 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA3P29320 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA3P29320 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA3P29320 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA3P29320 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA3P29320 KRT18P60-201ENST00000312876 1297 ntBASIC21.69■■□□□ 1.06
EPHA3P29320 AC022616.5-201ENST00000518796 181 ntBASIC21.69■■□□□ 1.06
EPHA3P29320 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA3P29320 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA3P29320 AL024507.2-201ENST00000606070 2574 ntBASIC21.69■■□□□ 1.06
EPHA3P29320 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA3P29320 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.69■■□□□ 1.06
EPHA3P29320 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA3P29320 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA3P29320 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
EPHA3P29320 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
EPHA3P29320 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EPHA3P29320 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.68■■□□□ 1.06
EPHA3P29320 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EPHA3P29320 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
EPHA3P29320 AC019171.1-201ENST00000601251 1056 ntBASIC21.68■■□□□ 1.06
EPHA3P29320 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.68■■□□□ 1.06
EPHA3P29320 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
EPHA3P29320 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
EPHA3P29320 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.68■■□□□ 1.06
EPHA3P29320 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
EPHA3P29320 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.68■■□□□ 1.06
EPHA3P29320 AC139530.1-201ENST00000575312 1977 ntBASIC21.68■■□□□ 1.06
EPHA3P29320 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHA3P29320 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.67■■□□□ 1.06
EPHA3P29320 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.67■■□□□ 1.06
EPHA3P29320 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHA3P29320 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EPHA3P29320 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHA3P29320 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
EPHA3P29320 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHA3P29320 AL137060.1-201ENST00000618151 2648 ntBASIC21.66■■□□□ 1.06
EPHA3P29320 AF131216.4-201ENST00000638924 1588 ntBASIC21.66■■□□□ 1.06
EPHA3P29320 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHA3P29320 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
EPHA3P29320 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.66■■□□□ 1.06
EPHA3P29320 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
EPHA3P29320 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.65■■□□□ 1.06
EPHA3P29320 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EPHA3P29320 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EPHA3P29320 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
EPHA3P29320 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.65■■□□□ 1.06
EPHA3P29320 AC120024.1-201ENST00000562672 995 ntBASIC21.65■■□□□ 1.06
EPHA3P29320 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.65■■□□□ 1.06
EPHA3P29320 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.65■■□□□ 1.06
EPHA3P29320 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EPHA3P29320 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
EPHA3P29320 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
EPHA3P29320 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
EPHA3P29320 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
EPHA3P29320 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.64■■□□□ 1.06
EPHA3P29320 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.64■■□□□ 1.06
EPHA3P29320 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
EPHA3P29320 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
EPHA3P29320 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.64■■□□□ 1.05
EPHA3P29320 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
EPHA3P29320 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
EPHA3P29320 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
EPHA3P29320 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
EPHA3P29320 AC092053.2-201ENST00000640557 1818 ntBASIC21.64■■□□□ 1.05
EPHA3P29320 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
EPHA3P29320 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.05
EPHA3P29320 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EPHA3P29320 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
EPHA3P29320 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EPHA3P29320 AC080038.3-201ENST00000623346 1952 ntBASIC21.63■■□□□ 1.05
EPHA3P29320 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EPHA3P29320 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.63■■□□□ 1.05
EPHA3P29320 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EPHA3P29320 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
EPHA3P29320 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
EPHA3P29320 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EPHA3P29320 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.63■■□□□ 1.05
EPHA3P29320 AC139795.1-202ENST00000500444 432 ntBASIC21.63■■□□□ 1.05
EPHA3P29320 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
EPHA3P29320 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.63■■□□□ 1.05
EPHA3P29320 C11orf96-202ENST00000528572 1834 ntBASIC21.63■■□□□ 1.05
EPHA3P29320 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
EPHA3P29320 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
EPHA3P29320 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms