Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 YBL036CYBL036C 774 nt5.07□□□□□ -1.6
MSH1P25846 MRM1YOR201C 1239 nt5.07□□□□□ -1.6
MSH1P25846 UBS1YBR165W 834 nt5.07□□□□□ -1.6
MSH1P25846 GRC3YLL035W 1899 nt5.07□□□□□ -1.6
MSH1P25846 PRP28YDR243C 1767 nt5.06□□□□□ -1.6
MSH1P25846 NPL4YBR170C 1743 nt5.06□□□□□ -1.6
MSH1P25846 YER067C-AYER067C-A 324 nt5.06□□□□□ -1.6
MSH1P25846 OKP1YGR179C 1221 nt5.06□□□□□ -1.6
MSH1P25846 YHR022CYHR022C 771 nt5.06□□□□□ -1.6
MSH1P25846 YHR069C-AYHR069C-A 363 nt5.06□□□□□ -1.6
MSH1P25846 YMR315WYMR315W 1050 nt5.06□□□□□ -1.6
MSH1P25846 AIM39YOL053W 1188 nt5.06□□□□□ -1.6
MSH1P25846 VPS68YOL129W 555 nt5.06□□□□□ -1.6
MSH1P25846 ARC40YBR234C 1155 nt5.06□□□□□ -1.6
MSH1P25846 POP4YBR257W 840 nt5.06□□□□□ -1.6
MSH1P25846 MRPL37YBR268W 318 nt5.06□□□□□ -1.6
MSH1P25846 RKM2YDR198C 1440 nt5.06□□□□□ -1.6
MSH1P25846 KIC1YHR102W 3243 nt5.05□□□□□ -1.6
MSH1P25846 YGL193CYGL193C 312 nt5.05□□□□□ -1.6
MSH1P25846 IMP3YHR148W 552 nt5.05□□□□□ -1.6
MSH1P25846 TVP38YKR088C 1014 nt5.05□□□□□ -1.6
MSH1P25846 CDC73YLR418C 1182 nt5.05□□□□□ -1.6
MSH1P25846 MED7YOL135C 669 nt5.05□□□□□ -1.6
MSH1P25846 BAG7YOR134W 1230 nt5.05□□□□□ -1.6
MSH1P25846 SHE3YBR130C 1278 nt5.05□□□□□ -1.6
MSH1P25846 EFM2YBR271W 1260 nt5.05□□□□□ -1.6
MSH1P25846 UGA2YBR006W 1494 nt5.05□□□□□ -1.6
MSH1P25846 BLM10YFL007W 6432 nt5.05□□□□□ -1.6
MSH1P25846 FDC1YDR539W 1512 nt5.04□□□□□ -1.6
MSH1P25846 NGL3YML118W 1518 nt5.04□□□□□ -1.6
MSH1P25846 ALD3YMR169C 1521 nt5.04□□□□□ -1.6
MSH1P25846 ALD2YMR170C 1521 nt5.04□□□□□ -1.6
MSH1P25846 YIL021C-AYIL021C-A 270 nt5.04□□□□□ -1.6
MSH1P25846 RPC17YJL011C 486 nt5.04□□□□□ -1.6
MSH1P25846 NIT3YLR351C 876 nt5.04□□□□□ -1.6
MSH1P25846 YLR363W-AYLR363W-A 258 nt5.04□□□□□ -1.6
MSH1P25846 PCL1YNL289W 840 nt5.04□□□□□ -1.6
MSH1P25846 SUP35YDR172W 2058 nt5.04□□□□□ -1.6
MSH1P25846 AKL1YBR059C 3327 nt5.03□□□□□ -1.6
MSH1P25846 MSC7YHR039C 1935 nt5.03□□□□□ -1.6
MSH1P25846 PRP19YLL036C 1512 nt5.03□□□□□ -1.6
MSH1P25846 GAL4YPL248C 2646 nt5.03□□□□□ -1.6
MSH1P25846 YDL012CYDL012C 324 nt5.03□□□□□ -1.6
MSH1P25846 PCL2YDL127W 927 nt5.03□□□□□ -1.6
MSH1P25846 MRPS35YGR165W 1038 nt5.03□□□□□ -1.6
MSH1P25846 PPE1YHR075C 1203 nt5.03□□□□□ -1.6
MSH1P25846 YJR012CYJR012C 624 nt5.03□□□□□ -1.6
MSH1P25846 YLR125WYLR125W 411 nt5.03□□□□□ -1.6
MSH1P25846 SEC65YML105C 822 nt5.03□□□□□ -1.6
MSH1P25846 ERD2YBL040C 660 nt5.03□□□□□ -1.6
MSH1P25846 CYM1YDR430C 2970 nt5.03□□□□□ -1.6
MSH1P25846 MMT1YMR177W 1533 nt5.02□□□□□ -1.61
MSH1P25846 RRP14YKL082C 1305 nt5.02□□□□□ -1.61
MSH1P25846 PAH1YMR165C 2589 nt5.02□□□□□ -1.61
MSH1P25846 AIR2YDL175C 1035 nt5.02□□□□□ -1.61
MSH1P25846 tK(CUU)CtK(CUU)C 73 nt5.02□□□□□ -1.61
MSH1P25846 tK(CUU)D1tK(CUU)D1 73 nt5.02□□□□□ -1.61
MSH1P25846 tK(CUU)D2tK(CUU)D2 73 nt5.02□□□□□ -1.61
MSH1P25846 tK(CUU)E1tK(CUU)E1 73 nt5.02□□□□□ -1.61
MSH1P25846 tK(CUU)E2tK(CUU)E2 73 nt5.02□□□□□ -1.61
MSH1P25846 tK(CUU)FtK(CUU)F 73 nt5.02□□□□□ -1.61
MSH1P25846 tK(CUU)G1tK(CUU)G1 73 nt5.02□□□□□ -1.61
MSH1P25846 tK(CUU)G2tK(CUU)G2 73 nt5.02□□□□□ -1.61
MSH1P25846 tK(CUU)G3tK(CUU)G3 73 nt5.02□□□□□ -1.61
MSH1P25846 tK(CUU)ItK(CUU)I 73 nt5.02□□□□□ -1.61
MSH1P25846 tK(CUU)JtK(CUU)J 73 nt5.02□□□□□ -1.61
MSH1P25846 tK(CUU)KtK(CUU)K 73 nt5.02□□□□□ -1.61
MSH1P25846 tK(CUU)MtK(CUU)M 73 nt5.02□□□□□ -1.61
MSH1P25846 tK(CUU)PtK(CUU)P 73 nt5.02□□□□□ -1.61
MSH1P25846 SUT1YGL162W 900 nt5.02□□□□□ -1.61
MSH1P25846 YLL047WYLL047W 384 nt5.02□□□□□ -1.61
MSH1P25846 YLR311CYLR311C 348 nt5.02□□□□□ -1.61
MSH1P25846 CPR3YML078W 549 nt5.02□□□□□ -1.61
MSH1P25846 GLO4YOR040W 858 nt5.02□□□□□ -1.61
MSH1P25846 GRX1YCL035C 333 nt5.02□□□□□ -1.61
MSH1P25846 TAF5YBR198C 2397 nt5.02□□□□□ -1.61
MSH1P25846 KCC4YCL024W 3114 nt5.02□□□□□ -1.61
MSH1P25846 TSL1YML100W 3297 nt5.02□□□□□ -1.61
MSH1P25846 POL12YBL035C 2118 nt5.02□□□□□ -1.61
MSH1P25846 AIM6YDL237W 1173 nt5.01□□□□□ -1.61
MSH1P25846 DAS2YDR020C 699 nt5.01□□□□□ -1.61
MSH1P25846 TRP4YDR354W 1143 nt5.01□□□□□ -1.61
MSH1P25846 SCS2YER120W 735 nt5.01□□□□□ -1.61
MSH1P25846 YGR035W-AYGR035W-A 222 nt5.01□□□□□ -1.61
MSH1P25846 NAT2YGR147C 867 nt5.01□□□□□ -1.61
MSH1P25846 VMA22YHR060W 546 nt5.01□□□□□ -1.61
MSH1P25846 YBL094CYBL094C 333 nt5.01□□□□□ -1.61
MSH1P25846 VPS21YOR089C 633 nt5.01□□□□□ -1.61
MSH1P25846 GDE1YPL110C 3672 nt5.01□□□□□ -1.61
MSH1P25846 NUP2YLR335W 2163 nt5.01□□□□□ -1.61
MSH1P25846 ALG11YNL048W 1647 nt5.01□□□□□ -1.61
MSH1P25846 MDM38YOL027C 1722 nt5□□□□□ -1.61
MSH1P25846 RTC5YOR118W 1704 nt5□□□□□ -1.61
MSH1P25846 SRO9YCL037C 1305 nt5□□□□□ -1.61
MSH1P25846 JEM1YJL073W 1938 nt5□□□□□ -1.61
MSH1P25846 RPC53YDL150W 1269 nt5□□□□□ -1.61
MSH1P25846 YDR290WYDR290W 330 nt5□□□□□ -1.61
MSH1P25846 PEX21YGR239C 867 nt5□□□□□ -1.61
MSH1P25846 YHL034W-AYHL034W-A 462 nt5□□□□□ -1.61
MSH1P25846 MRPS8YMR158W 468 nt5□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 39 ms