Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRMP19623 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRMP19623 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRMP19623 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.48■□□□□ 0.71
SRMP19623 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRMP19623 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SRMP19623 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRMP19623 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRMP19623 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRMP19623 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRMP19623 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRMP19623 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.47■□□□□ 0.71
SRMP19623 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRMP19623 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SRMP19623 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRMP19623 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SRMP19623 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRMP19623 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SRMP19623 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SRMP19623 AL353803.4-201ENST00000565882 1934 ntBASIC19.47■□□□□ 0.71
SRMP19623 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRMP19623 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SRMP19623 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRMP19623 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRMP19623 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
SRMP19623 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SRMP19623 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRMP19623 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SRMP19623 DUX4L9-201ENST00000449051 1259 ntBASIC19.46■□□□□ 0.71
SRMP19623 MIR4449-201ENST00000578365 66 ntBASIC19.46■□□□□ 0.71
SRMP19623 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.46■□□□□ 0.71
SRMP19623 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SRMP19623 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SRMP19623 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRMP19623 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRMP19623 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SRMP19623 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SRMP19623 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.45■□□□□ 0.7
SRMP19623 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRMP19623 RNF126P1-201ENST00000567452 1320 ntBASIC19.45■□□□□ 0.7
SRMP19623 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SRMP19623 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRMP19623 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRMP19623 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRMP19623 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SRMP19623 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRMP19623 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRMP19623 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.44■□□□□ 0.7
SRMP19623 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SRMP19623 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.44■□□□□ 0.7
SRMP19623 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SRMP19623 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SRMP19623 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SRMP19623 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.44■□□□□ 0.7
SRMP19623 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.43■□□□□ 0.7
SRMP19623 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.43■□□□□ 0.7
SRMP19623 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRMP19623 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRMP19623 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SRMP19623 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.43■□□□□ 0.7
SRMP19623 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.43■□□□□ 0.7
SRMP19623 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.43■□□□□ 0.7
SRMP19623 AL024507.2-201ENST00000606070 2574 ntBASIC19.43■□□□□ 0.7
SRMP19623 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRMP19623 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SRMP19623 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRMP19623 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRMP19623 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRMP19623 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SRMP19623 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.42■□□□□ 0.7
SRMP19623 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRMP19623 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SRMP19623 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
SRMP19623 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.42■□□□□ 0.7
SRMP19623 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SRMP19623 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
SRMP19623 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRMP19623 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRMP19623 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRMP19623 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRMP19623 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.41■□□□□ 0.7
SRMP19623 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRMP19623 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRMP19623 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRMP19623 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.41■□□□□ 0.7
SRMP19623 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRMP19623 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.41■□□□□ 0.7
SRMP19623 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRMP19623 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRMP19623 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SRMP19623 AC080038.3-201ENST00000623346 1952 ntBASIC19.41■□□□□ 0.7
SRMP19623 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SRMP19623 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.4■□□□□ 0.7
SRMP19623 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRMP19623 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRMP19623 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SRMP19623 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRMP19623 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SRMP19623 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SRMP19623 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms