Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 AC135731.1-201ENST00000569415 2548 ntBASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
CSB-PGBD3P0DP91 SHF-207ENST00000560540 2062 ntTSL 5 BASIC29.87■■■□□ 2.37
CSB-PGBD3P0DP91 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CSB-PGBD3P0DP91 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC29.87■■■□□ 2.37
CSB-PGBD3P0DP91 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
CSB-PGBD3P0DP91 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC29.87■■■□□ 2.37
CSB-PGBD3P0DP91 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC29.87■■■□□ 2.37
CSB-PGBD3P0DP91 AC105233.4-201ENST00000642045 216 ntBASIC29.87■■■□□ 2.37
CSB-PGBD3P0DP91 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CSB-PGBD3P0DP91 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CSB-PGBD3P0DP91 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC29.87■■■□□ 2.37
CSB-PGBD3P0DP91 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC29.87■■■□□ 2.37
CSB-PGBD3P0DP91 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CSB-PGBD3P0DP91 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC29.86■■■□□ 2.37
CSB-PGBD3P0DP91 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
CSB-PGBD3P0DP91 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CSB-PGBD3P0DP91 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CSB-PGBD3P0DP91 HLA-L-209ENST00000420110 1011 ntBASIC29.86■■■□□ 2.37
CSB-PGBD3P0DP91 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
CSB-PGBD3P0DP91 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
CSB-PGBD3P0DP91 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CSB-PGBD3P0DP91 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC29.86■■■□□ 2.37
CSB-PGBD3P0DP91 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
CSB-PGBD3P0DP91 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC29.86■■■□□ 2.37
CSB-PGBD3P0DP91 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CSB-PGBD3P0DP91 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CSB-PGBD3P0DP91 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC29.85■■■□□ 2.37
CSB-PGBD3P0DP91 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC29.85■■■□□ 2.37
CSB-PGBD3P0DP91 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CSB-PGBD3P0DP91 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC29.84■■■□□ 2.37
CSB-PGBD3P0DP91 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CSB-PGBD3P0DP91 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CSB-PGBD3P0DP91 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CSB-PGBD3P0DP91 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC29.84■■■□□ 2.37
CSB-PGBD3P0DP91 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC29.84■■■□□ 2.37
CSB-PGBD3P0DP91 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC29.83■■■□□ 2.37
CSB-PGBD3P0DP91 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC29.83■■■□□ 2.37
CSB-PGBD3P0DP91 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC29.83■■■□□ 2.37
CSB-PGBD3P0DP91 AP005435.1-201ENST00000529293 1178 ntBASIC29.83■■■□□ 2.37
CSB-PGBD3P0DP91 DUX4L4-201ENST00000566884 1269 ntBASIC29.83■■■□□ 2.37
CSB-PGBD3P0DP91 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC29.83■■■□□ 2.37
CSB-PGBD3P0DP91 FP325331.1-202ENST00000623531 1380 ntBASIC29.82■■■□□ 2.36
CSB-PGBD3P0DP91 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CSB-PGBD3P0DP91 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC29.82■■■□□ 2.36
CSB-PGBD3P0DP91 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CSB-PGBD3P0DP91 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC29.82■■■□□ 2.36
CSB-PGBD3P0DP91 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CSB-PGBD3P0DP91 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CSB-PGBD3P0DP91 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
CSB-PGBD3P0DP91 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC29.81■■■□□ 2.36
CSB-PGBD3P0DP91 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC29.81■■■□□ 2.36
CSB-PGBD3P0DP91 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC29.81■■■□□ 2.36
CSB-PGBD3P0DP91 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
CSB-PGBD3P0DP91 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC29.81■■■□□ 2.36
CSB-PGBD3P0DP91 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC29.81■■■□□ 2.36
CSB-PGBD3P0DP91 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC29.81■■■□□ 2.36
CSB-PGBD3P0DP91 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CSB-PGBD3P0DP91 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
CSB-PGBD3P0DP91 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CSB-PGBD3P0DP91 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CSB-PGBD3P0DP91 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC29.8■■■□□ 2.36
CSB-PGBD3P0DP91 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CSB-PGBD3P0DP91 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC29.8■■■□□ 2.36
CSB-PGBD3P0DP91 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC29.8■■■□□ 2.36
CSB-PGBD3P0DP91 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC29.8■■■□□ 2.36
CSB-PGBD3P0DP91 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
CSB-PGBD3P0DP91 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
CSB-PGBD3P0DP91 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CSB-PGBD3P0DP91 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
CSB-PGBD3P0DP91 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
CSB-PGBD3P0DP91 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CSB-PGBD3P0DP91 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CSB-PGBD3P0DP91 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
CSB-PGBD3P0DP91 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
CSB-PGBD3P0DP91 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC29.79■■■□□ 2.36
CSB-PGBD3P0DP91 AC080038.1-201ENST00000611274 1154 ntBASIC29.79■■■□□ 2.36
CSB-PGBD3P0DP91 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC29.79■■■□□ 2.36
CSB-PGBD3P0DP91 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC29.78■■■□□ 2.36
CSB-PGBD3P0DP91 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CSB-PGBD3P0DP91 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
CSB-PGBD3P0DP91 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
CSB-PGBD3P0DP91 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC29.77■■■□□ 2.36
CSB-PGBD3P0DP91 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CSB-PGBD3P0DP91 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC29.77■■■□□ 2.36
CSB-PGBD3P0DP91 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC29.77■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms