Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 YDL186WYDL186W 834 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 YDR124WYDR124W 975 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 YDR417CYDR417C 372 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 RPL28YGL103W 450 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 tR(UCU)Q1tR(UCU)Q1 73 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 PAN5YHR063C 1140 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 DBP8YHR169W 1296 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 HYM1YKL189W 1200 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 snR10snR10 245 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 BUB3YOR026W 1026 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 PNT1YOR266W 1272 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 ATG29YPL166W 642 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 SUT2YPR009W 807 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 snR32snR32 188 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 TRE1YPL176C 2352 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 TYW1YPL207W 2433 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 SSA2YLL024C 1920 nt4.64□□□□□ -1.67
TY2A-LR1P0C2J4 BUD14YAR014C 2130 nt4.63□□□□□ -1.67
TY2A-LR1P0C2J4 YCR050CYCR050C 309 nt4.63□□□□□ -1.67
TY2A-LR1P0C2J4 BUD26YDR241W 288 nt4.63□□□□□ -1.67
TY2A-LR1P0C2J4 ACT1YFL039C 1128 nt4.63□□□□□ -1.67
TY2A-LR1P0C2J4 NPY1YGL067W 1155 nt4.63□□□□□ -1.67
TY2A-LR1P0C2J4 GCD7YLR291C 1146 nt4.63□□□□□ -1.67
TY2A-LR1P0C2J4 ENT1YDL161W 1365 nt4.63□□□□□ -1.67
TY2A-LR1P0C2J4 SMF1YOL122C 1728 nt4.63□□□□□ -1.67
TY2A-LR1P0C2J4 TFA1YKL028W 1449 nt4.63□□□□□ -1.67
TY2A-LR1P0C2J4 GCN20YFR009W 2259 nt4.62□□□□□ -1.67
TY2A-LR1P0C2J4 ARO2YGL148W 1131 nt4.62□□□□□ -1.67
TY2A-LR1P0C2J4 tR(ACG)JtR(ACG)J 73 nt4.62□□□□□ -1.67
TY2A-LR1P0C2J4 CYC1YJR048W 330 nt4.62□□□□□ -1.67
TY2A-LR1P0C2J4 YML057C-AYML057C-A 390 nt4.62□□□□□ -1.67
TY2A-LR1P0C2J4 ATG16YMR159C 453 nt4.62□□□□□ -1.67
TY2A-LR1P0C2J4 MDG1YNL173C 1101 nt4.62□□□□□ -1.67
TY2A-LR1P0C2J4 HRR25YPL204W 1485 nt4.62□□□□□ -1.67
TY2A-LR1P0C2J4 DRN1YGR093W 1524 nt4.62□□□□□ -1.67
TY2A-LR1P0C2J4 MIH1YMR036C 1665 nt4.61□□□□□ -1.67
TY2A-LR1P0C2J4 RKM3YBR030W 1659 nt4.61□□□□□ -1.67
TY2A-LR1P0C2J4 TRM1YDR120C 1713 nt4.61□□□□□ -1.67
TY2A-LR1P0C2J4 MRPL32YCR003W 552 nt4.61□□□□□ -1.67
TY2A-LR1P0C2J4 RRP8YDR083W 1179 nt4.61□□□□□ -1.67
TY2A-LR1P0C2J4 RNH202YDR279W 1053 nt4.61□□□□□ -1.67
TY2A-LR1P0C2J4 NOP16YER002W 696 nt4.61□□□□□ -1.67
TY2A-LR1P0C2J4 YLR042CYLR042C 486 nt4.61□□□□□ -1.67
TY2A-LR1P0C2J4 YNL162W-AYNL162W-A 219 nt4.61□□□□□ -1.67
TY2A-LR1P0C2J4 YNL174WYNL174W 573 nt4.61□□□□□ -1.67
TY2A-LR1P0C2J4 PEX34YCL056C 435 nt4.61□□□□□ -1.67
TY2A-LR1P0C2J4 COT1YOR316C 1320 nt4.61□□□□□ -1.67
TY2A-LR1P0C2J4 PUF2YPR042C 3228 nt4.61□□□□□ -1.67
TY2A-LR1P0C2J4 YMR102CYMR102C 2505 nt4.61□□□□□ -1.67
TY2A-LR1P0C2J4 SKM1YOL113W 1968 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 GRS1YBR121C 2004 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 NTH2YBR001C 2343 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 ATH1YPR026W 3636 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 RRP45YDR280W 918 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 FSH1YHR049W 732 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 ERV41YML067C 1059 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 SHE1YBL031W 1017 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 RPS10BYMR230W 318 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 MUM2YBR057C 1101 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 YPR142CYPR142C 564 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 SYP1YCR030C 2613 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 GAS4YOL132W 1416 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 POL31YJR006W 1464 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 MCX1YBR227C 1563 nt4.6□□□□□ -1.67
TY2A-LR1P0C2J4 DNF2YDR093W 4839 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 SUR2YDR297W 1050 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 PAD1YDR538W 729 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 ARG3YJL088W 1017 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 MTD1YKR080W 963 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 SIC1YLR079W 855 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 YLR345WYLR345W 1530 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 IOC4YMR044W 1428 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 MDJ2YNL328C 441 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 YOR034C-AYOR034C-A 243 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 PDR10YOR328W 4695 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 YBR056W-AYBR056W-A 201 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 GRE1YPL223C 507 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 NHP6AYPR052C 282 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 YCL001W-AYCL001W-A 462 nt4.59□□□□□ -1.67
TY2A-LR1P0C2J4 DOA1YKL213C 2148 nt4.58□□□□□ -1.68
TY2A-LR1P0C2J4 EXO1YOR033C 2109 nt4.58□□□□□ -1.68
TY2A-LR1P0C2J4 TDA11YHR159W 1515 nt4.58□□□□□ -1.68
TY2A-LR1P0C2J4 HUL4YJR036C 2679 nt4.58□□□□□ -1.68
TY2A-LR1P0C2J4 YCR015CYCR015C 954 nt4.58□□□□□ -1.68
TY2A-LR1P0C2J4 SHR3YDL212W 633 nt4.58□□□□□ -1.68
TY2A-LR1P0C2J4 VPS29YHR012W 849 nt4.58□□□□□ -1.68
TY2A-LR1P0C2J4 TEF4YKL081W 1239 nt4.58□□□□□ -1.68
TY2A-LR1P0C2J4 ATG8YBL078C 354 nt4.58□□□□□ -1.68
TY2A-LR1P0C2J4 ARX1YDR101C 1782 nt4.58□□□□□ -1.68
TY2A-LR1P0C2J4 NUP116YMR047C 3342 nt4.57□□□□□ -1.68
TY2A-LR1P0C2J4 RCM1YNL022C 1473 nt4.57□□□□□ -1.68
TY2A-LR1P0C2J4 NOP8YOL144W 1455 nt4.57□□□□□ -1.68
TY2A-LR1P0C2J4 FZO1YBR179C 2568 nt4.57□□□□□ -1.68
TY2A-LR1P0C2J4 YCR101CYCR101C 549 nt4.57□□□□□ -1.68
TY2A-LR1P0C2J4 POP8YBL018C 402 nt4.57□□□□□ -1.68
TY2A-LR1P0C2J4 PRX1YBL064C 786 nt4.57□□□□□ -1.68
TY2A-LR1P0C2J4 TRS33YOR115C 807 nt4.57□□□□□ -1.68
TY2A-LR1P0C2J4 SET6YPL165C 1122 nt4.57□□□□□ -1.68
TY2A-LR1P0C2J4 YPL199CYPL199C 723 nt4.57□□□□□ -1.68
TY2A-LR1P0C2J4 ECM33YBR078W 1290 nt4.57□□□□□ -1.68
Retrieved 100 of 7,029 protein–RNA pairs in 13.6 ms