Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSF1P09603 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CSF1P09603 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSF1P09603 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CSF1P09603 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CSF1P09603 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CSF1P09603 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CSF1P09603 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.2■□□□□ 0.66
CSF1P09603 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSF1P09603 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
CSF1P09603 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSF1P09603 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSF1P09603 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSF1P09603 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.2■□□□□ 0.66
CSF1P09603 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSF1P09603 KRT8P33-201ENST00000508125 1423 ntBASIC19.2■□□□□ 0.66
CSF1P09603 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSF1P09603 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CSF1P09603 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.2■□□□□ 0.66
CSF1P09603 AC010980.1-201ENST00000587192 1142 ntBASIC19.2■□□□□ 0.66
CSF1P09603 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CSF1P09603 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSF1P09603 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CSF1P09603 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSF1P09603 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.19■□□□□ 0.66
CSF1P09603 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSF1P09603 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CSF1P09603 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSF1P09603 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSF1P09603 YBX1P4-201ENST00000392794 808 ntBASIC19.19■□□□□ 0.66
CSF1P09603 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CSF1P09603 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSF1P09603 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.19■□□□□ 0.66
CSF1P09603 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.19■□□□□ 0.66
CSF1P09603 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.19■□□□□ 0.66
CSF1P09603 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CSF1P09603 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CSF1P09603 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CSF1P09603 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSF1P09603 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSF1P09603 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSF1P09603 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CSF1P09603 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CSF1P09603 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1P09603 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1P09603 AL137060.1-201ENST00000618151 2648 ntBASIC19.18■□□□□ 0.66
CSF1P09603 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1P09603 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.18■□□□□ 0.66
CSF1P09603 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
CSF1P09603 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.18■□□□□ 0.66
CSF1P09603 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CSF1P09603 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.18■□□□□ 0.66
CSF1P09603 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.18■□□□□ 0.66
CSF1P09603 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.18■□□□□ 0.66
CSF1P09603 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CSF1P09603 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1P09603 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.18■□□□□ 0.66
CSF1P09603 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1P09603 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1P09603 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
CSF1P09603 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1P09603 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1P09603 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.17■□□□□ 0.66
CSF1P09603 MIR6765-201ENST00000614092 87 ntBASIC19.17■□□□□ 0.66
CSF1P09603 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
CSF1P09603 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1P09603 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1P09603 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1P09603 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CSF1P09603 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1P09603 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1P09603 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1P09603 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CSF1P09603 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1P09603 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1P09603 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1P09603 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1P09603 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1P09603 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.16■□□□□ 0.66
CSF1P09603 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CSF1P09603 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1P09603 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1P09603 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.15■□□□□ 0.66
CSF1P09603 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CSF1P09603 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSF1P09603 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSF1P09603 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSF1P09603 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSF1P09603 AC018755.3-202ENST00000596210 929 ntBASIC19.15■□□□□ 0.66
CSF1P09603 RAP2CP1-202ENST00000605179 643 ntBASIC19.15■□□□□ 0.66
CSF1P09603 AC092053.2-201ENST00000640557 1818 ntBASIC19.15■□□□□ 0.66
CSF1P09603 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CSF1P09603 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CSF1P09603 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSF1P09603 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CSF1P09603 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CSF1P09603 C11orf96-202ENST00000528572 1834 ntBASIC19.14■□□□□ 0.65
CSF1P09603 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CSF1P09603 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CSF1P09603 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms