Protein–RNA interactions for Protein: P08118

MSMB, Beta-microseminoprotein, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSMBP08118 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSMBP08118 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSMBP08118 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSMBP08118 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.35■□□□□ 0.53
MSMBP08118 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
MSMBP08118 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSMBP08118 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
MSMBP08118 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSMBP08118 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
MSMBP08118 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
MSMBP08118 AC010525.1-201ENST00000585559 441 ntBASIC18.35■□□□□ 0.53
MSMBP08118 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MSMBP08118 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSMBP08118 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
MSMBP08118 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MSMBP08118 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSMBP08118 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSMBP08118 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSMBP08118 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
MSMBP08118 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSMBP08118 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.34■□□□□ 0.53
MSMBP08118 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
MSMBP08118 AC123595.1-201ENST00000440769 1046 ntBASIC18.34■□□□□ 0.53
MSMBP08118 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.34■□□□□ 0.53
MSMBP08118 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MSMBP08118 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MSMBP08118 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
MSMBP08118 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
MSMBP08118 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MSMBP08118 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MSMBP08118 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MSMBP08118 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MSMBP08118 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MSMBP08118 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MSMBP08118 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.33■□□□□ 0.52
MSMBP08118 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.33■□□□□ 0.52
MSMBP08118 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.33■□□□□ 0.52
MSMBP08118 MIR6084-201ENST00000622012 110 ntBASIC18.33■□□□□ 0.52
MSMBP08118 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MSMBP08118 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MSMBP08118 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.33■□□□□ 0.52
MSMBP08118 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MSMBP08118 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MSMBP08118 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MSMBP08118 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MSMBP08118 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MSMBP08118 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MSMBP08118 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSMBP08118 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.32■□□□□ 0.52
MSMBP08118 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSMBP08118 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSMBP08118 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.32■□□□□ 0.52
MSMBP08118 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSMBP08118 AP005435.1-201ENST00000529293 1178 ntBASIC18.32■□□□□ 0.52
MSMBP08118 AL031602.1-201ENST00000633169 911 ntBASIC18.32■□□□□ 0.52
MSMBP08118 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSMBP08118 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.32■□□□□ 0.52
MSMBP08118 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSMBP08118 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MSMBP08118 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSMBP08118 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MSMBP08118 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MSMBP08118 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MSMBP08118 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MSMBP08118 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MSMBP08118 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSMBP08118 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.31■□□□□ 0.52
MSMBP08118 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSMBP08118 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MSMBP08118 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.31■□□□□ 0.52
MSMBP08118 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
MSMBP08118 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.31■□□□□ 0.52
MSMBP08118 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MSMBP08118 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.31■□□□□ 0.52
MSMBP08118 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.31■□□□□ 0.52
MSMBP08118 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.31■□□□□ 0.52
MSMBP08118 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.31■□□□□ 0.52
MSMBP08118 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSMBP08118 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MSMBP08118 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.3■□□□□ 0.52
MSMBP08118 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSMBP08118 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.3■□□□□ 0.52
MSMBP08118 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MSMBP08118 KRT18P5-201ENST00000436075 1291 ntBASIC18.3■□□□□ 0.52
MSMBP08118 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MSMBP08118 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.3■□□□□ 0.52
MSMBP08118 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MSMBP08118 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.3■□□□□ 0.52
MSMBP08118 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.3■□□□□ 0.52
MSMBP08118 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MSMBP08118 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MSMBP08118 AC020928.2-201ENST00000588717 2197 ntBASIC18.3■□□□□ 0.52
MSMBP08118 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.3■□□□□ 0.52
MSMBP08118 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MSMBP08118 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MSMBP08118 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.29■□□□□ 0.52
MSMBP08118 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.29■□□□□ 0.52
MSMBP08118 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.29■□□□□ 0.52
MSMBP08118 DUX4L2-201ENST00000561772 1275 ntBASIC18.29■□□□□ 0.52
MSMBP08118 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms