Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
PDGFAP04085 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PDGFAP04085 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFAP04085 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.8■□□□□ 0.92
PDGFAP04085 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.8■□□□□ 0.92
PDGFAP04085 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFAP04085 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.8■□□□□ 0.92
PDGFAP04085 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.8■□□□□ 0.92
PDGFAP04085 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.8■□□□□ 0.92
PDGFAP04085 AL137784.2-201ENST00000607332 1000 ntBASIC20.8■□□□□ 0.92
PDGFAP04085 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFAP04085 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.8■□□□□ 0.92
PDGFAP04085 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFAP04085 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PDGFAP04085 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFAP04085 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDGFAP04085 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PDGFAP04085 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFAP04085 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFAP04085 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PDGFAP04085 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
PDGFAP04085 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFAP04085 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFAP04085 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PDGFAP04085 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.79■□□□□ 0.92
PDGFAP04085 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.79■□□□□ 0.92
PDGFAP04085 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.79■□□□□ 0.92
PDGFAP04085 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFAP04085 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFAP04085 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDGFAP04085 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PDGFAP04085 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFAP04085 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFAP04085 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
PDGFAP04085 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFAP04085 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.78■□□□□ 0.92
PDGFAP04085 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.78■□□□□ 0.92
PDGFAP04085 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFAP04085 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.78■□□□□ 0.92
PDGFAP04085 SLC47A1P1-202ENST00000449666 945 ntBASIC20.78■□□□□ 0.92
PDGFAP04085 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFAP04085 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFAP04085 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDGFAP04085 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFAP04085 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFAP04085 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDGFAP04085 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PDGFAP04085 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.77■□□□□ 0.92
PDGFAP04085 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.77■□□□□ 0.92
PDGFAP04085 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.77■□□□□ 0.92
PDGFAP04085 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.77■□□□□ 0.92
PDGFAP04085 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.77■□□□□ 0.91
PDGFAP04085 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PDGFAP04085 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFAP04085 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.76■□□□□ 0.91
PDGFAP04085 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFAP04085 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFAP04085 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.76■□□□□ 0.91
PDGFAP04085 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFAP04085 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.76■□□□□ 0.91
PDGFAP04085 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.76■□□□□ 0.91
PDGFAP04085 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.76■□□□□ 0.91
PDGFAP04085 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PDGFAP04085 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.76■□□□□ 0.91
PDGFAP04085 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFAP04085 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFAP04085 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFAP04085 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.76■□□□□ 0.91
PDGFAP04085 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFAP04085 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDGFAP04085 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.76■□□□□ 0.91
PDGFAP04085 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PDGFAP04085 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PDGFAP04085 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PDGFAP04085 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
PDGFAP04085 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFAP04085 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFAP04085 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PDGFAP04085 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFAP04085 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.75■□□□□ 0.91
PDGFAP04085 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PDGFAP04085 MIR6084-201ENST00000622012 110 ntBASIC20.75■□□□□ 0.91
PDGFAP04085 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFAP04085 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.75■□□□□ 0.91
PDGFAP04085 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDGFAP04085 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFAP04085 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.74■□□□□ 0.91
PDGFAP04085 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.74■□□□□ 0.91
PDGFAP04085 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
PDGFAP04085 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFAP04085 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFAP04085 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDGFAP04085 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFAP04085 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PDGFAP04085 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFAP04085 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.73■□□□□ 0.91
PDGFAP04085 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.73■□□□□ 0.91
PDGFAP04085 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFAP04085 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDGFAP04085 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms