Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL2A1P02458 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL2A1P02458 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
COL2A1P02458 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL2A1P02458 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
COL2A1P02458 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.43■■□□□ 1.82
COL2A1P02458 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
COL2A1P02458 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
COL2A1P02458 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.42■■□□□ 1.82
COL2A1P02458 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.42■■□□□ 1.82
COL2A1P02458 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL2A1P02458 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL2A1P02458 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.42■■□□□ 1.82
COL2A1P02458 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
COL2A1P02458 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL2A1P02458 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
COL2A1P02458 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL2A1P02458 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.41■■□□□ 1.82
COL2A1P02458 DUX4L2-201ENST00000561772 1275 ntBASIC26.41■■□□□ 1.82
COL2A1P02458 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.41■■□□□ 1.82
COL2A1P02458 DUX4L6-201ENST00000626483 1275 ntBASIC26.41■■□□□ 1.82
COL2A1P02458 DUX4L1-201ENST00000627662 1275 ntBASIC26.41■■□□□ 1.82
COL2A1P02458 DUX4L8-201ENST00000629013 1275 ntBASIC26.41■■□□□ 1.82
COL2A1P02458 DUX4L3-201ENST00000630187 1275 ntBASIC26.41■■□□□ 1.82
COL2A1P02458 DUX4L7-201ENST00000630678 1275 ntBASIC26.41■■□□□ 1.82
COL2A1P02458 DUX4L5-201ENST00000630834 1275 ntBASIC26.41■■□□□ 1.82
COL2A1P02458 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.41■■□□□ 1.82
COL2A1P02458 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.4■■□□□ 1.82
COL2A1P02458 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL2A1P02458 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL2A1P02458 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL2A1P02458 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL2A1P02458 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.4■■□□□ 1.82
COL2A1P02458 KRT18P5-201ENST00000436075 1291 ntBASIC26.4■■□□□ 1.82
COL2A1P02458 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.4■■□□□ 1.82
COL2A1P02458 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
COL2A1P02458 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
COL2A1P02458 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
COL2A1P02458 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.39■■□□□ 1.82
COL2A1P02458 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL2A1P02458 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
COL2A1P02458 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
COL2A1P02458 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL2A1P02458 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
COL2A1P02458 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.38■■□□□ 1.81
COL2A1P02458 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL2A1P02458 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
COL2A1P02458 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.38■■□□□ 1.81
COL2A1P02458 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.38■■□□□ 1.81
COL2A1P02458 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL2A1P02458 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.38■■□□□ 1.81
COL2A1P02458 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
COL2A1P02458 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.37■■□□□ 1.81
COL2A1P02458 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL2A1P02458 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL2A1P02458 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.37■■□□□ 1.81
COL2A1P02458 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.37■■□□□ 1.81
COL2A1P02458 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
COL2A1P02458 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
COL2A1P02458 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL2A1P02458 MIR6084-201ENST00000622012 110 ntBASIC26.36■■□□□ 1.81
COL2A1P02458 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL2A1P02458 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL2A1P02458 STX4-202ENST00000394998 1498 ntTSL 2 BASIC26.36■■□□□ 1.81
COL2A1P02458 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
COL2A1P02458 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
COL2A1P02458 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
COL2A1P02458 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
COL2A1P02458 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.36■■□□□ 1.81
COL2A1P02458 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
COL2A1P02458 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.36■■□□□ 1.81
COL2A1P02458 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.36■■□□□ 1.81
COL2A1P02458 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.36■■□□□ 1.81
COL2A1P02458 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.36■■□□□ 1.81
COL2A1P02458 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL2A1P02458 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.35■■□□□ 1.81
COL2A1P02458 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL2A1P02458 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
COL2A1P02458 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.35■■□□□ 1.81
COL2A1P02458 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC26.35■■□□□ 1.81
COL2A1P02458 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
COL2A1P02458 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL2A1P02458 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL2A1P02458 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL2A1P02458 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
COL2A1P02458 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.34■■□□□ 1.81
COL2A1P02458 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.34■■□□□ 1.81
COL2A1P02458 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC26.34■■□□□ 1.81
COL2A1P02458 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.34■■□□□ 1.81
COL2A1P02458 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.34■■□□□ 1.81
COL2A1P02458 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.34■■□□□ 1.81
COL2A1P02458 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.34■■□□□ 1.81
COL2A1P02458 TERF1P2-201ENST00000583350 1212 ntBASIC26.34■■□□□ 1.81
COL2A1P02458 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.34■■□□□ 1.81
COL2A1P02458 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
COL2A1P02458 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.33■■□□□ 1.81
COL2A1P02458 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.33■■□□□ 1.81
COL2A1P02458 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
COL2A1P02458 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.33■■□□□ 1.81
COL2A1P02458 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms