Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LTAP01374 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LTAP01374 FBXW4P1-201ENST00000426721 2239 ntBASIC16.83■□□□□ 0.28
LTAP01374 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LTAP01374 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LTAP01374 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
LTAP01374 AC087393.1-201ENST00000582896 145 ntBASIC16.83■□□□□ 0.28
LTAP01374 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LTAP01374 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LTAP01374 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LTAP01374 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LTAP01374 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LTAP01374 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LTAP01374 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LTAP01374 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.82■□□□□ 0.28
LTAP01374 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
LTAP01374 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LTAP01374 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LTAP01374 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LTAP01374 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LTAP01374 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LTAP01374 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LTAP01374 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LTAP01374 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LTAP01374 AC133552.2-201ENST00000619106 1032 ntBASIC16.82■□□□□ 0.28
LTAP01374 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LTAP01374 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LTAP01374 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.82■□□□□ 0.28
LTAP01374 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LTAP01374 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LTAP01374 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LTAP01374 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
LTAP01374 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LTAP01374 PKD1P6-201ENST00000343738 4769 ntBASIC16.81■□□□□ 0.28
LTAP01374 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.81■□□□□ 0.28
LTAP01374 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LTAP01374 AC080038.3-201ENST00000623346 1952 ntBASIC16.81■□□□□ 0.28
LTAP01374 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LTAP01374 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LTAP01374 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LTAP01374 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LTAP01374 AC018755.3-202ENST00000596210 929 ntBASIC16.81■□□□□ 0.28
LTAP01374 AC011551.1-201ENST00000614101 683 ntBASIC16.81■□□□□ 0.28
LTAP01374 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.81■□□□□ 0.28
LTAP01374 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LTAP01374 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LTAP01374 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC16.8■□□□□ 0.28
LTAP01374 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LTAP01374 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LTAP01374 MIR639-201ENST00000384974 98 ntBASIC16.8■□□□□ 0.28
LTAP01374 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LTAP01374 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LTAP01374 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LTAP01374 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
LTAP01374 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LTAP01374 AL353803.4-201ENST00000565882 1934 ntBASIC16.8■□□□□ 0.28
LTAP01374 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LTAP01374 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LTAP01374 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LTAP01374 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LTAP01374 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LTAP01374 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LTAP01374 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LTAP01374 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LTAP01374 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LTAP01374 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LTAP01374 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LTAP01374 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LTAP01374 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
LTAP01374 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LTAP01374 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.78■□□□□ 0.28
LTAP01374 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LTAP01374 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LTAP01374 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LTAP01374 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.78■□□□□ 0.28
LTAP01374 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LTAP01374 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LTAP01374 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LTAP01374 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.78■□□□□ 0.28
LTAP01374 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LTAP01374 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LTAP01374 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LTAP01374 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.78■□□□□ 0.28
LTAP01374 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LTAP01374 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LTAP01374 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LTAP01374 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LTAP01374 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LTAP01374 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.77■□□□□ 0.28
LTAP01374 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LTAP01374 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
LTAP01374 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LTAP01374 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LTAP01374 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.76■□□□□ 0.27
LTAP01374 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.76■□□□□ 0.27
LTAP01374 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.76■□□□□ 0.27
LTAP01374 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LTAP01374 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.75■□□□□ 0.27
LTAP01374 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LTAP01374 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms