Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC25.9■■□□□ 1.74
ALDH1A1P00352 MDK-213ENST00000617138 635 ntTSL 2 BASIC25.9■■□□□ 1.74
ALDH1A1P00352 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ALDH1A1P00352 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ALDH1A1P00352 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ALDH1A1P00352 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ALDH1A1P00352 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.89■■□□□ 1.74
ALDH1A1P00352 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ALDH1A1P00352 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
ALDH1A1P00352 AC004854.2-201ENST00000608450 1441 ntBASIC25.88■■□□□ 1.73
ALDH1A1P00352 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
ALDH1A1P00352 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
ALDH1A1P00352 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ALDH1A1P00352 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
ALDH1A1P00352 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ALDH1A1P00352 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
ALDH1A1P00352 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ALDH1A1P00352 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ALDH1A1P00352 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ALDH1A1P00352 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.88■■□□□ 1.73
ALDH1A1P00352 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ALDH1A1P00352 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ALDH1A1P00352 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
ALDH1A1P00352 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.87■■□□□ 1.73
ALDH1A1P00352 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.87■■□□□ 1.73
ALDH1A1P00352 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.87■■□□□ 1.73
ALDH1A1P00352 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
ALDH1A1P00352 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ALDH1A1P00352 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
ALDH1A1P00352 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.87■■□□□ 1.73
ALDH1A1P00352 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ALDH1A1P00352 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ALDH1A1P00352 MIR663A-201ENST00000385250 93 ntBASIC25.86■■□□□ 1.73
ALDH1A1P00352 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
ALDH1A1P00352 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.86■■□□□ 1.73
ALDH1A1P00352 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.86■■□□□ 1.73
ALDH1A1P00352 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ALDH1A1P00352 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ALDH1A1P00352 FP325331.1-202ENST00000623531 1380 ntBASIC25.85■■□□□ 1.73
ALDH1A1P00352 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ALDH1A1P00352 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
ALDH1A1P00352 TSPY20P-201ENST00000450910 630 ntBASIC25.85■■□□□ 1.73
ALDH1A1P00352 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC25.85■■□□□ 1.73
ALDH1A1P00352 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
ALDH1A1P00352 AC142086.2-201ENST00000569753 217 ntBASIC25.85■■□□□ 1.73
ALDH1A1P00352 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25.85■■□□□ 1.73
ALDH1A1P00352 AC011767.1-201ENST00000617410 1153 ntBASIC25.85■■□□□ 1.73
ALDH1A1P00352 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.84■■□□□ 1.73
ALDH1A1P00352 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.84■■□□□ 1.73
ALDH1A1P00352 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
ALDH1A1P00352 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
ALDH1A1P00352 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ALDH1A1P00352 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
ALDH1A1P00352 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ALDH1A1P00352 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.84■■□□□ 1.73
ALDH1A1P00352 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.84■■□□□ 1.73
ALDH1A1P00352 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ALDH1A1P00352 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
ALDH1A1P00352 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ALDH1A1P00352 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.83■■□□□ 1.73
ALDH1A1P00352 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
ALDH1A1P00352 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.83■■□□□ 1.73
ALDH1A1P00352 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
ALDH1A1P00352 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC25.83■■□□□ 1.73
ALDH1A1P00352 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.83■■□□□ 1.73
ALDH1A1P00352 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
ALDH1A1P00352 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
ALDH1A1P00352 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.83■■□□□ 1.73
ALDH1A1P00352 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC25.83■■□□□ 1.73
ALDH1A1P00352 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
ALDH1A1P00352 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.72
ALDH1A1P00352 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
ALDH1A1P00352 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
ALDH1A1P00352 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.82■■□□□ 1.72
ALDH1A1P00352 APTR-205ENST00000447009 902 ntTSL 2 BASIC25.82■■□□□ 1.72
ALDH1A1P00352 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC25.82■■□□□ 1.72
ALDH1A1P00352 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
ALDH1A1P00352 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ALDH1A1P00352 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ALDH1A1P00352 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ALDH1A1P00352 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.81■■□□□ 1.72
ALDH1A1P00352 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC25.81■■□□□ 1.72
ALDH1A1P00352 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.81■■□□□ 1.72
ALDH1A1P00352 PARP1-210ENST00000629232 477 ntTSL 5 BASIC25.81■■□□□ 1.72
ALDH1A1P00352 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
ALDH1A1P00352 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ALDH1A1P00352 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ALDH1A1P00352 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.8■■□□□ 1.72
ALDH1A1P00352 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ALDH1A1P00352 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
ALDH1A1P00352 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.8■■□□□ 1.72
ALDH1A1P00352 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC25.8■■□□□ 1.72
ALDH1A1P00352 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC25.8■■□□□ 1.72
ALDH1A1P00352 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
ALDH1A1P00352 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ALDH1A1P00352 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ALDH1A1P00352 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ALDH1A1P00352 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ALDH1A1P00352 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC25.79■■□□□ 1.72
ALDH1A1P00352 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms