Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22■■□□□ 1.11
SUPT3HO75486 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22■■□□□ 1.11
SUPT3HO75486 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SUPT3HO75486 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SUPT3HO75486 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22■■□□□ 1.11
SUPT3HO75486 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
SUPT3HO75486 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22■■□□□ 1.11
SUPT3HO75486 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SUPT3HO75486 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.99■■□□□ 1.11
SUPT3HO75486 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
SUPT3HO75486 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SUPT3HO75486 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SUPT3HO75486 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.99■■□□□ 1.11
SUPT3HO75486 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SUPT3HO75486 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SUPT3HO75486 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SUPT3HO75486 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SUPT3HO75486 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.99■■□□□ 1.11
SUPT3HO75486 BX664725.1-201ENST00000438252 379 ntBASIC21.99■■□□□ 1.11
SUPT3HO75486 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SUPT3HO75486 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SUPT3HO75486 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SUPT3HO75486 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SUPT3HO75486 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SUPT3HO75486 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SUPT3HO75486 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.98■■□□□ 1.11
SUPT3HO75486 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SUPT3HO75486 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.98■■□□□ 1.11
SUPT3HO75486 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.98■■□□□ 1.11
SUPT3HO75486 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
SUPT3HO75486 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.98■■□□□ 1.11
SUPT3HO75486 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.98■■□□□ 1.11
SUPT3HO75486 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SUPT3HO75486 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SUPT3HO75486 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SUPT3HO75486 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
SUPT3HO75486 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SUPT3HO75486 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SUPT3HO75486 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SUPT3HO75486 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SUPT3HO75486 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.97■■□□□ 1.11
SUPT3HO75486 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SUPT3HO75486 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.97■■□□□ 1.11
SUPT3HO75486 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SUPT3HO75486 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SUPT3HO75486 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SUPT3HO75486 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
SUPT3HO75486 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SUPT3HO75486 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SUPT3HO75486 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SUPT3HO75486 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.96■■□□□ 1.11
SUPT3HO75486 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SUPT3HO75486 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
SUPT3HO75486 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SUPT3HO75486 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SUPT3HO75486 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.96■■□□□ 1.11
SUPT3HO75486 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.96■■□□□ 1.11
SUPT3HO75486 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SUPT3HO75486 AC021242.3-201ENST00000607598 1377 ntBASIC21.96■■□□□ 1.11
SUPT3HO75486 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SUPT3HO75486 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SUPT3HO75486 AL117328.2-201ENST00000624617 1940 ntBASIC21.96■■□□□ 1.11
SUPT3HO75486 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SUPT3HO75486 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
SUPT3HO75486 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
SUPT3HO75486 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
SUPT3HO75486 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.95■■□□□ 1.1
SUPT3HO75486 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SUPT3HO75486 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SUPT3HO75486 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SUPT3HO75486 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
SUPT3HO75486 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.95■■□□□ 1.1
SUPT3HO75486 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.95■■□□□ 1.1
SUPT3HO75486 AL353803.4-201ENST00000565882 1934 ntBASIC21.95■■□□□ 1.1
SUPT3HO75486 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SUPT3HO75486 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SUPT3HO75486 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SUPT3HO75486 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SUPT3HO75486 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SUPT3HO75486 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SUPT3HO75486 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SUPT3HO75486 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SUPT3HO75486 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SUPT3HO75486 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.94■■□□□ 1.1
SUPT3HO75486 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.94■■□□□ 1.1
SUPT3HO75486 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SUPT3HO75486 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
SUPT3HO75486 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.94■■□□□ 1.1
SUPT3HO75486 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SUPT3HO75486 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SUPT3HO75486 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SUPT3HO75486 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.93■■□□□ 1.1
SUPT3HO75486 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SUPT3HO75486 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SUPT3HO75486 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SUPT3HO75486 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.93■■□□□ 1.1
SUPT3HO75486 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SUPT3HO75486 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SUPT3HO75486 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SUPT3HO75486 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms