Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.29■■□□□ 1.8
CTNND1O60716 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.29■■□□□ 1.8
CTNND1O60716 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CTNND1O60716 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CTNND1O60716 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CTNND1O60716 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.28■■□□□ 1.8
CTNND1O60716 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CTNND1O60716 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CTNND1O60716 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CTNND1O60716 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CTNND1O60716 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.28■■□□□ 1.8
CTNND1O60716 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.28■■□□□ 1.8
CTNND1O60716 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CTNND1O60716 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.28■■□□□ 1.8
CTNND1O60716 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
CTNND1O60716 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CTNND1O60716 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CTNND1O60716 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CTNND1O60716 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CTNND1O60716 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CTNND1O60716 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CTNND1O60716 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CTNND1O60716 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CTNND1O60716 AL137784.2-201ENST00000607332 1000 ntBASIC26.27■■□□□ 1.8
CTNND1O60716 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CTNND1O60716 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CTNND1O60716 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.27■■□□□ 1.8
CTNND1O60716 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.27■■□□□ 1.8
CTNND1O60716 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.27■■□□□ 1.8
CTNND1O60716 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CTNND1O60716 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CTNND1O60716 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CTNND1O60716 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CTNND1O60716 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CTNND1O60716 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CTNND1O60716 AC090192.1-201ENST00000517740 490 ntBASIC26.26■■□□□ 1.79
CTNND1O60716 AP005435.1-201ENST00000529293 1178 ntBASIC26.26■■□□□ 1.79
CTNND1O60716 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CTNND1O60716 CCDC92B-201ENST00000575506 885 ntBASIC26.26■■□□□ 1.79
CTNND1O60716 AC092437.1-201ENST00000624794 1048 ntBASIC26.26■■□□□ 1.79
CTNND1O60716 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CTNND1O60716 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CTNND1O60716 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CTNND1O60716 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CTNND1O60716 LINC01529-204ENST00000636474 1715 ntBASIC26.25■■□□□ 1.79
CTNND1O60716 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CTNND1O60716 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CTNND1O60716 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CTNND1O60716 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CTNND1O60716 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CTNND1O60716 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CTNND1O60716 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CTNND1O60716 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC26.25■■□□□ 1.79
CTNND1O60716 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
CTNND1O60716 AC144652.1-201ENST00000609974 1624 ntBASIC26.25■■□□□ 1.79
CTNND1O60716 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
CTNND1O60716 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CTNND1O60716 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CTNND1O60716 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.24■■□□□ 1.79
CTNND1O60716 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.24■■□□□ 1.79
CTNND1O60716 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CTNND1O60716 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
CTNND1O60716 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.24■■□□□ 1.79
CTNND1O60716 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CTNND1O60716 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.24■■□□□ 1.79
CTNND1O60716 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
CTNND1O60716 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.24■■□□□ 1.79
CTNND1O60716 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CTNND1O60716 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CTNND1O60716 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CTNND1O60716 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CTNND1O60716 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CTNND1O60716 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.23■■□□□ 1.79
CTNND1O60716 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.23■■□□□ 1.79
CTNND1O60716 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.23■■□□□ 1.79
CTNND1O60716 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CTNND1O60716 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
CTNND1O60716 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CTNND1O60716 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CTNND1O60716 AC142381.3-201ENST00000568208 1670 ntBASIC26.22■■□□□ 1.79
CTNND1O60716 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CTNND1O60716 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.22■■□□□ 1.79
CTNND1O60716 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CTNND1O60716 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CTNND1O60716 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.22■■□□□ 1.79
CTNND1O60716 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CTNND1O60716 AC138932.3-201ENST00000567634 1902 ntBASIC26.22■■□□□ 1.79
CTNND1O60716 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CTNND1O60716 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CTNND1O60716 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.21■■□□□ 1.79
CTNND1O60716 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC26.21■■□□□ 1.79
CTNND1O60716 TERF1P2-201ENST00000583350 1212 ntBASIC26.21■■□□□ 1.79
CTNND1O60716 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CTNND1O60716 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CTNND1O60716 LINC02228-203ENST00000641970 1355 ntBASIC26.2■■□□□ 1.79
CTNND1O60716 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CTNND1O60716 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC26.2■■□□□ 1.78
CTNND1O60716 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.2■■□□□ 1.78
CTNND1O60716 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CTNND1O60716 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms