Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GMDSO60547 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.62■□□□□ 0.73
GMDSO60547 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
GMDSO60547 BX664725.1-201ENST00000438252 379 ntBASIC19.62■□□□□ 0.73
GMDSO60547 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.62■□□□□ 0.73
GMDSO60547 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GMDSO60547 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
GMDSO60547 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GMDSO60547 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
GMDSO60547 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GMDSO60547 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
GMDSO60547 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GMDSO60547 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.61■□□□□ 0.73
GMDSO60547 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.61■□□□□ 0.73
GMDSO60547 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
GMDSO60547 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.61■□□□□ 0.73
GMDSO60547 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
GMDSO60547 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
GMDSO60547 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
GMDSO60547 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
GMDSO60547 AC127496.7-201ENST00000625110 1798 ntBASIC19.61■□□□□ 0.73
GMDSO60547 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
GMDSO60547 ANOS2P-203ENST00000472227 1816 ntBASIC19.6■□□□□ 0.73
GMDSO60547 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GMDSO60547 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GMDSO60547 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GMDSO60547 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GMDSO60547 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.6■□□□□ 0.73
GMDSO60547 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GMDSO60547 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.6■□□□□ 0.73
GMDSO60547 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.6■□□□□ 0.73
GMDSO60547 Z92544.1-202ENST00000571933 1220 ntBASIC19.6■□□□□ 0.73
GMDSO60547 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
GMDSO60547 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
GMDSO60547 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
GMDSO60547 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
GMDSO60547 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GMDSO60547 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GMDSO60547 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
GMDSO60547 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GMDSO60547 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.59■□□□□ 0.73
GMDSO60547 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.59■□□□□ 0.73
GMDSO60547 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
GMDSO60547 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
GMDSO60547 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
GMDSO60547 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
GMDSO60547 ALDH1A3-203ENST00000557963 1670 ntBASIC19.59■□□□□ 0.73
GMDSO60547 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
GMDSO60547 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.58■□□□□ 0.73
GMDSO60547 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
GMDSO60547 DUSP8P3-201ENST00000399571 1760 ntBASIC19.58■□□□□ 0.73
GMDSO60547 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
GMDSO60547 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.58■□□□□ 0.72
GMDSO60547 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
GMDSO60547 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
GMDSO60547 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GMDSO60547 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.58■□□□□ 0.72
GMDSO60547 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.58■□□□□ 0.72
GMDSO60547 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GMDSO60547 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GMDSO60547 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
GMDSO60547 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
GMDSO60547 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.58■□□□□ 0.72
GMDSO60547 AC021242.3-201ENST00000607598 1377 ntBASIC19.57■□□□□ 0.72
GMDSO60547 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GMDSO60547 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GMDSO60547 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
GMDSO60547 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GMDSO60547 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GMDSO60547 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.57■□□□□ 0.72
GMDSO60547 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
GMDSO60547 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
GMDSO60547 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
GMDSO60547 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GMDSO60547 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GMDSO60547 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.57■□□□□ 0.72
GMDSO60547 AC004448.1-201ENST00000458332 883 ntBASIC19.57■□□□□ 0.72
GMDSO60547 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GMDSO60547 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.57■□□□□ 0.72
GMDSO60547 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GMDSO60547 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GMDSO60547 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.57■□□□□ 0.72
GMDSO60547 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
GMDSO60547 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GMDSO60547 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GMDSO60547 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
GMDSO60547 ECEL1P1-201ENST00000373592 1742 ntBASIC19.56■□□□□ 0.72
GMDSO60547 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GMDSO60547 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GMDSO60547 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
GMDSO60547 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GMDSO60547 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GMDSO60547 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.56■□□□□ 0.72
GMDSO60547 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GMDSO60547 KRT125P-201ENST00000546827 989 ntBASIC19.56■□□□□ 0.72
GMDSO60547 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.56■□□□□ 0.72
GMDSO60547 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GMDSO60547 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.56■□□□□ 0.72
GMDSO60547 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GMDSO60547 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms