Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SSSCA1O60232 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.17■□□□□ 0.5
SSSCA1O60232 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSSCA1O60232 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SSSCA1O60232 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.17■□□□□ 0.5
SSSCA1O60232 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.17■□□□□ 0.5
SSSCA1O60232 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSSCA1O60232 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SSSCA1O60232 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SSSCA1O60232 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SSSCA1O60232 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SSSCA1O60232 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
SSSCA1O60232 C11orf96-202ENST00000528572 1834 ntBASIC18.16■□□□□ 0.5
SSSCA1O60232 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SSSCA1O60232 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SSSCA1O60232 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SSSCA1O60232 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSSCA1O60232 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.16■□□□□ 0.5
SSSCA1O60232 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.16■□□□□ 0.5
SSSCA1O60232 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.16■□□□□ 0.5
SSSCA1O60232 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SSSCA1O60232 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSSCA1O60232 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSSCA1O60232 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSSCA1O60232 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSSCA1O60232 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SSSCA1O60232 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SSSCA1O60232 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSSCA1O60232 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.15■□□□□ 0.5
SSSCA1O60232 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSSCA1O60232 AC092053.2-201ENST00000640557 1818 ntBASIC18.15■□□□□ 0.5
SSSCA1O60232 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSSCA1O60232 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSSCA1O60232 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSSCA1O60232 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSSCA1O60232 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSSCA1O60232 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SSSCA1O60232 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SSSCA1O60232 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SSSCA1O60232 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.14■□□□□ 0.5
SSSCA1O60232 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSSCA1O60232 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSSCA1O60232 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSSCA1O60232 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSSCA1O60232 AL592295.1-201ENST00000400984 884 ntBASIC18.14■□□□□ 0.49
SSSCA1O60232 RPS2P7-201ENST00000447334 885 ntBASIC18.14■□□□□ 0.49
SSSCA1O60232 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSSCA1O60232 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSSCA1O60232 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SSSCA1O60232 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SSSCA1O60232 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SSSCA1O60232 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.13■□□□□ 0.49
SSSCA1O60232 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 AC139530.1-201ENST00000575312 1977 ntBASIC18.13■□□□□ 0.49
SSSCA1O60232 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SSSCA1O60232 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SSSCA1O60232 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SSSCA1O60232 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.13■□□□□ 0.49
SSSCA1O60232 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SSSCA1O60232 FBXW4P1-201ENST00000426721 2239 ntBASIC18.13■□□□□ 0.49
SSSCA1O60232 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSSCA1O60232 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSSCA1O60232 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SSSCA1O60232 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSSCA1O60232 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSSCA1O60232 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.12■□□□□ 0.49
SSSCA1O60232 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSSCA1O60232 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC18.12■□□□□ 0.49
SSSCA1O60232 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSSCA1O60232 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.12■□□□□ 0.49
SSSCA1O60232 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSSCA1O60232 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSSCA1O60232 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSSCA1O60232 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SSSCA1O60232 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSSCA1O60232 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSSCA1O60232 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SSSCA1O60232 AC079630.1-202ENST00000618127 1840 ntBASIC18.12■□□□□ 0.49
SSSCA1O60232 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
SSSCA1O60232 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SSSCA1O60232 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSSCA1O60232 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSSCA1O60232 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSSCA1O60232 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.11■□□□□ 0.49
SSSCA1O60232 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SSSCA1O60232 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms