Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC28.58■■■□□ 2.17
ABCC4O15439 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCC4O15439 SERBP1P1-201ENST00000396021 1160 ntBASIC28.57■■■□□ 2.16
ABCC4O15439 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
ABCC4O15439 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
ABCC4O15439 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
ABCC4O15439 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
ABCC4O15439 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCC4O15439 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
ABCC4O15439 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCC4O15439 RARA-203ENST00000394086 2008 ntTSL 2 BASIC28.56■■■□□ 2.16
ABCC4O15439 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCC4O15439 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCC4O15439 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.56■■■□□ 2.16
ABCC4O15439 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC28.56■■■□□ 2.16
ABCC4O15439 NFE2L3P1-201ENST00000588207 1959 ntBASIC28.56■■■□□ 2.16
ABCC4O15439 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCC4O15439 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ABCC4O15439 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
ABCC4O15439 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ABCC4O15439 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC28.55■■■□□ 2.16
ABCC4O15439 DUSP8P5-201ENST00000422884 1815 ntBASIC28.55■■■□□ 2.16
ABCC4O15439 PTMA-205ENST00000410064 814 ntTSL 2 BASIC28.55■■■□□ 2.16
ABCC4O15439 AC091305.1-201ENST00000479476 895 ntBASIC28.55■■■□□ 2.16
ABCC4O15439 MIR5787-201ENST00000611784 55 ntBASIC28.55■■■□□ 2.16
ABCC4O15439 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
ABCC4O15439 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ABCC4O15439 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
ABCC4O15439 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
ABCC4O15439 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
ABCC4O15439 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ABCC4O15439 DUSP8P3-201ENST00000399571 1760 ntBASIC28.53■■■□□ 2.16
ABCC4O15439 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ABCC4O15439 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC28.53■■■□□ 2.16
ABCC4O15439 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC28.53■■■□□ 2.16
ABCC4O15439 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC28.53■■■□□ 2.16
ABCC4O15439 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.53■■■□□ 2.16
ABCC4O15439 AC099791.2-201ENST00000605725 427 ntBASIC28.53■■■□□ 2.16
ABCC4O15439 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
ABCC4O15439 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
ABCC4O15439 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
ABCC4O15439 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC28.52■■■□□ 2.16
ABCC4O15439 PTCHD3P2-201ENST00000424937 1205 ntBASIC28.52■■■□□ 2.16
ABCC4O15439 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC28.52■■■□□ 2.16
ABCC4O15439 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC28.52■■■□□ 2.16
ABCC4O15439 AC092171.4-201ENST00000609130 632 ntBASIC28.52■■■□□ 2.16
ABCC4O15439 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC28.52■■■□□ 2.16
ABCC4O15439 C17orf82-201ENST00000623772 1530 ntBASIC28.52■■■□□ 2.16
ABCC4O15439 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
ABCC4O15439 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
ABCC4O15439 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ABCC4O15439 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC28.52■■■□□ 2.16
ABCC4O15439 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC28.52■■■□□ 2.16
ABCC4O15439 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.51■■■□□ 2.15
ABCC4O15439 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.51■■■□□ 2.15
ABCC4O15439 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
ABCC4O15439 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
ABCC4O15439 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.51■■■□□ 2.15
ABCC4O15439 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC28.51■■■□□ 2.15
ABCC4O15439 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
ABCC4O15439 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC28.5■■■□□ 2.15
ABCC4O15439 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
ABCC4O15439 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC28.5■■■□□ 2.15
ABCC4O15439 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ABCC4O15439 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28.49■■■□□ 2.15
ABCC4O15439 CA15P2-201ENST00000611168 834 ntBASIC28.49■■■□□ 2.15
ABCC4O15439 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ABCC4O15439 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC28.49■■■□□ 2.15
ABCC4O15439 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC28.49■■■□□ 2.15
ABCC4O15439 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
ABCC4O15439 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ABCC4O15439 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
ABCC4O15439 AC144652.1-201ENST00000609974 1624 ntBASIC28.49■■■□□ 2.15
ABCC4O15439 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
ABCC4O15439 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC28.49■■■□□ 2.15
ABCC4O15439 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
ABCC4O15439 AC104564.3-201ENST00000582367 638 ntBASIC28.48■■■□□ 2.15
ABCC4O15439 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC28.48■■■□□ 2.15
ABCC4O15439 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC28.48■■■□□ 2.15
ABCC4O15439 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
ABCC4O15439 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
ABCC4O15439 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
ABCC4O15439 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC28.48■■■□□ 2.15
ABCC4O15439 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
ABCC4O15439 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ABCC4O15439 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC28.47■■■□□ 2.15
ABCC4O15439 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
ABCC4O15439 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC28.47■■■□□ 2.15
ABCC4O15439 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
ABCC4O15439 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
ABCC4O15439 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ABCC4O15439 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
ABCC4O15439 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
ABCC4O15439 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
ABCC4O15439 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
ABCC4O15439 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
ABCC4O15439 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
ABCC4O15439 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC28.46■■■□□ 2.15
ABCC4O15439 NKILA-201ENST00000613231 537 ntTSL 4 BASIC28.46■■■□□ 2.15
ABCC4O15439 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC28.46■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms