Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.74■■□□□ 1.87
FOXN1O15353 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.74■■□□□ 1.87
FOXN1O15353 AL354811.1-201ENST00000610286 706 ntBASIC26.74■■□□□ 1.87
FOXN1O15353 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.74■■□□□ 1.87
FOXN1O15353 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
FOXN1O15353 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
FOXN1O15353 LINC02228-203ENST00000641970 1355 ntBASIC26.73■■□□□ 1.87
FOXN1O15353 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.73■■□□□ 1.87
FOXN1O15353 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC26.73■■□□□ 1.87
FOXN1O15353 AC090877.2-201ENST00000558441 1738 ntBASIC26.73■■□□□ 1.87
FOXN1O15353 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
FOXN1O15353 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
FOXN1O15353 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
FOXN1O15353 GAS2L1P2-201ENST00000436355 1356 ntBASIC26.72■■□□□ 1.87
FOXN1O15353 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
FOXN1O15353 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
FOXN1O15353 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
FOXN1O15353 MIR572-201ENST00000384983 95 ntBASIC26.72■■□□□ 1.87
FOXN1O15353 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
FOXN1O15353 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
FOXN1O15353 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.72■■□□□ 1.87
FOXN1O15353 MIR3181-201ENST00000578512 73 ntBASIC26.72■■□□□ 1.87
FOXN1O15353 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.72■■□□□ 1.87
FOXN1O15353 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
FOXN1O15353 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
FOXN1O15353 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FOXN1O15353 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
FOXN1O15353 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
FOXN1O15353 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.71■■□□□ 1.87
FOXN1O15353 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FOXN1O15353 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
FOXN1O15353 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
FOXN1O15353 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
FOXN1O15353 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
FOXN1O15353 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.7■■□□□ 1.86
FOXN1O15353 AC137761.2-201ENST00000561729 223 ntBASIC26.7■■□□□ 1.86
FOXN1O15353 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC26.7■■□□□ 1.86
FOXN1O15353 AC145350.3-201ENST00000569033 163 ntBASIC26.7■■□□□ 1.86
FOXN1O15353 WT1-AS_3.1-201ENST00000613262 234 ntBASIC26.7■■□□□ 1.86
FOXN1O15353 FOXO3B-201ENST00000395675 1928 ntBASIC26.7■■□□□ 1.86
FOXN1O15353 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
FOXN1O15353 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
FOXN1O15353 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
FOXN1O15353 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.69■■□□□ 1.86
FOXN1O15353 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
FOXN1O15353 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.69■■□□□ 1.86
FOXN1O15353 MIR4651-201ENST00000582622 73 ntBASIC26.69■■□□□ 1.86
FOXN1O15353 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
FOXN1O15353 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
FOXN1O15353 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
FOXN1O15353 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
FOXN1O15353 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.68■■□□□ 1.86
FOXN1O15353 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
FOXN1O15353 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
FOXN1O15353 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
FOXN1O15353 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC26.68■■□□□ 1.86
FOXN1O15353 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
FOXN1O15353 KRT18P6-201ENST00000555540 1265 ntBASIC26.68■■□□□ 1.86
FOXN1O15353 AC241377.3-202ENST00000626088 1088 ntBASIC26.68■■□□□ 1.86
FOXN1O15353 AC241585.3-202ENST00000628937 1088 ntBASIC26.68■■□□□ 1.86
FOXN1O15353 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
FOXN1O15353 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
FOXN1O15353 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.68■■□□□ 1.86
FOXN1O15353 AC009102.2-201ENST00000606772 1639 ntBASIC26.68■■□□□ 1.86
FOXN1O15353 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.68■■□□□ 1.86
FOXN1O15353 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
FOXN1O15353 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
FOXN1O15353 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.67■■□□□ 1.86
FOXN1O15353 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
FOXN1O15353 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
FOXN1O15353 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
FOXN1O15353 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.67■■□□□ 1.86
FOXN1O15353 AC008687.6-201ENST00000596318 630 ntBASIC26.67■■□□□ 1.86
FOXN1O15353 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
FOXN1O15353 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
FOXN1O15353 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
FOXN1O15353 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
FOXN1O15353 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
FOXN1O15353 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
FOXN1O15353 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
FOXN1O15353 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.66■■□□□ 1.86
FOXN1O15353 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
FOXN1O15353 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.66■■□□□ 1.86
FOXN1O15353 KRT18P61-201ENST00000585825 1298 ntBASIC26.66■■□□□ 1.86
FOXN1O15353 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.66■■□□□ 1.86
FOXN1O15353 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
FOXN1O15353 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
FOXN1O15353 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.66■■□□□ 1.86
FOXN1O15353 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
FOXN1O15353 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
FOXN1O15353 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26.65■■□□□ 1.86
FOXN1O15353 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26.65■■□□□ 1.86
FOXN1O15353 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.65■■□□□ 1.86
FOXN1O15353 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.65■■□□□ 1.86
FOXN1O15353 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.65■■□□□ 1.86
FOXN1O15353 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.65■■□□□ 1.86
FOXN1O15353 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
FOXN1O15353 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.64■■□□□ 1.86
FOXN1O15353 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
FOXN1O15353 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms