Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPK3BL1B0FP48 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.55■■□□□ 1.2
UPK3BL1B0FP48 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.55■■□□□ 1.2
UPK3BL1B0FP48 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.55■■□□□ 1.2
UPK3BL1B0FP48 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.55■■□□□ 1.2
UPK3BL1B0FP48 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
UPK3BL1B0FP48 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
UPK3BL1B0FP48 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
UPK3BL1B0FP48 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UPK3BL1B0FP48 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.54■■□□□ 1.2
UPK3BL1B0FP48 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
UPK3BL1B0FP48 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UPK3BL1B0FP48 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UPK3BL1B0FP48 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.54■■□□□ 1.2
UPK3BL1B0FP48 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UPK3BL1B0FP48 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
UPK3BL1B0FP48 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
UPK3BL1B0FP48 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.53■■□□□ 1.2
UPK3BL1B0FP48 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
UPK3BL1B0FP48 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
UPK3BL1B0FP48 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
UPK3BL1B0FP48 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.52■■□□□ 1.2
UPK3BL1B0FP48 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
UPK3BL1B0FP48 AC008764.7-201ENST00000593779 1081 ntBASIC22.52■■□□□ 1.2
UPK3BL1B0FP48 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
UPK3BL1B0FP48 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
UPK3BL1B0FP48 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
UPK3BL1B0FP48 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
UPK3BL1B0FP48 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
UPK3BL1B0FP48 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.19
UPK3BL1B0FP48 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
UPK3BL1B0FP48 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.52■■□□□ 1.19
UPK3BL1B0FP48 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 AC099791.1-201ENST00000416440 715 ntBASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 AC034268.1-201ENST00000441047 882 ntBASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
UPK3BL1B0FP48 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
UPK3BL1B0FP48 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
UPK3BL1B0FP48 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
UPK3BL1B0FP48 AC144652.1-201ENST00000609974 1624 ntBASIC22.5■■□□□ 1.19
UPK3BL1B0FP48 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.5■■□□□ 1.19
UPK3BL1B0FP48 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
UPK3BL1B0FP48 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.5■■□□□ 1.19
UPK3BL1B0FP48 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
UPK3BL1B0FP48 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.5■■□□□ 1.19
UPK3BL1B0FP48 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.5■■□□□ 1.19
UPK3BL1B0FP48 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
UPK3BL1B0FP48 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.5■■□□□ 1.19
UPK3BL1B0FP48 FP325331.1-202ENST00000623531 1380 ntBASIC22.5■■□□□ 1.19
UPK3BL1B0FP48 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
UPK3BL1B0FP48 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.49■■□□□ 1.19
UPK3BL1B0FP48 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
UPK3BL1B0FP48 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
UPK3BL1B0FP48 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.49■■□□□ 1.19
UPK3BL1B0FP48 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
UPK3BL1B0FP48 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
UPK3BL1B0FP48 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
UPK3BL1B0FP48 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
UPK3BL1B0FP48 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
UPK3BL1B0FP48 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
UPK3BL1B0FP48 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.48■■□□□ 1.19
UPK3BL1B0FP48 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UPK3BL1B0FP48 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
UPK3BL1B0FP48 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.48■■□□□ 1.19
UPK3BL1B0FP48 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
UPK3BL1B0FP48 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
UPK3BL1B0FP48 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.48■■□□□ 1.19
UPK3BL1B0FP48 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.48■■□□□ 1.19
UPK3BL1B0FP48 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.48■■□□□ 1.19
UPK3BL1B0FP48 MIR3181-201ENST00000578512 73 ntBASIC22.48■■□□□ 1.19
UPK3BL1B0FP48 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
UPK3BL1B0FP48 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 AC022517.1-201ENST00000592429 346 ntBASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 pRNA.6-201ENST00000610482 90 ntBASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 pRNA.5-201ENST00000612139 90 ntBASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 pRNA.11-201ENST00000618423 90 ntBASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 pRNA.13-201ENST00000619112 90 ntBASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 AC136469.2-201ENST00000623944 1028 ntBASIC22.47■■□□□ 1.19
UPK3BL1B0FP48 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms