Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.29■■□□□ 1.16
TBC1D3FA6NER0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.29■■□□□ 1.16
TBC1D3FA6NER0 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.29■■□□□ 1.16
TBC1D3FA6NER0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TBC1D3FA6NER0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
TBC1D3FA6NER0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.28■■□□□ 1.16
TBC1D3FA6NER0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.28■■□□□ 1.16
TBC1D3FA6NER0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.28■■□□□ 1.16
TBC1D3FA6NER0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.28■■□□□ 1.16
TBC1D3FA6NER0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.28■■□□□ 1.16
TBC1D3FA6NER0 AC104564.3-201ENST00000582367 638 ntBASIC22.28■■□□□ 1.16
TBC1D3FA6NER0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.28■■□□□ 1.16
TBC1D3FA6NER0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.28■■□□□ 1.16
TBC1D3FA6NER0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TBC1D3FA6NER0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TBC1D3FA6NER0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.28■■□□□ 1.16
TBC1D3FA6NER0 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TBC1D3FA6NER0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.27■■□□□ 1.16
TBC1D3FA6NER0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
TBC1D3FA6NER0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D3FA6NER0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D3FA6NER0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D3FA6NER0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
TBC1D3FA6NER0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D3FA6NER0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D3FA6NER0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D3FA6NER0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.26■■□□□ 1.15
TBC1D3FA6NER0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D3FA6NER0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
TBC1D3FA6NER0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D3FA6NER0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TBC1D3FA6NER0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 AC004812.2-201ENST00000611079 2094 ntBASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
TBC1D3FA6NER0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 AL139125.2-201ENST00000623134 1869 ntBASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 IGHV3-19-201ENST00000521488 291 ntBASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 AC010525.1-201ENST00000585559 441 ntBASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
TBC1D3FA6NER0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
TBC1D3FA6NER0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms