Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHISA3A0PJX4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHISA3A0PJX4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.53■□□□□ 0.72
SHISA3A0PJX4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.53■□□□□ 0.72
SHISA3A0PJX4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHISA3A0PJX4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SHISA3A0PJX4 AC087742.1-201ENST00000575880 1738 ntBASIC19.53■□□□□ 0.72
SHISA3A0PJX4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHISA3A0PJX4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.53■□□□□ 0.72
SHISA3A0PJX4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHISA3A0PJX4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHISA3A0PJX4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHISA3A0PJX4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHISA3A0PJX4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHISA3A0PJX4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHISA3A0PJX4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHISA3A0PJX4 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.52■□□□□ 0.72
SHISA3A0PJX4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHISA3A0PJX4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SHISA3A0PJX4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
SHISA3A0PJX4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHISA3A0PJX4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SHISA3A0PJX4 AL353803.4-201ENST00000565882 1934 ntBASIC19.51■□□□□ 0.71
SHISA3A0PJX4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHISA3A0PJX4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
SHISA3A0PJX4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SHISA3A0PJX4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHISA3A0PJX4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.51■□□□□ 0.71
SHISA3A0PJX4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.51■□□□□ 0.71
SHISA3A0PJX4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SHISA3A0PJX4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHISA3A0PJX4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHISA3A0PJX4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.5■□□□□ 0.71
SHISA3A0PJX4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHISA3A0PJX4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHISA3A0PJX4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHISA3A0PJX4 SPCS2P3-201ENST00000500401 656 ntBASIC19.5■□□□□ 0.71
SHISA3A0PJX4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SHISA3A0PJX4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SHISA3A0PJX4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SHISA3A0PJX4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHISA3A0PJX4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.49■□□□□ 0.71
SHISA3A0PJX4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.49■□□□□ 0.71
SHISA3A0PJX4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SHISA3A0PJX4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SHISA3A0PJX4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SHISA3A0PJX4 AC133552.2-201ENST00000619106 1032 ntBASIC19.49■□□□□ 0.71
SHISA3A0PJX4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHISA3A0PJX4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHISA3A0PJX4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SHISA3A0PJX4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 AC087393.1-201ENST00000582896 145 ntBASIC19.48■□□□□ 0.71
SHISA3A0PJX4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 FAM99A-202ENST00000538190 1989 ntBASIC19.48■□□□□ 0.71
SHISA3A0PJX4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.48■□□□□ 0.71
SHISA3A0PJX4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHISA3A0PJX4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHISA3A0PJX4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SHISA3A0PJX4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHISA3A0PJX4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SHISA3A0PJX4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
SHISA3A0PJX4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.47■□□□□ 0.71
SHISA3A0PJX4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.46■□□□□ 0.71
SHISA3A0PJX4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA3A0PJX4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA3A0PJX4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA3A0PJX4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA3A0PJX4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SHISA3A0PJX4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SHISA3A0PJX4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms