Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV8-2A0A0B4J237 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.92■□□□□ 0.3
TRAV8-2A0A0B4J237 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-2A0A0B4J237 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-2A0A0B4J237 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TRAV8-2A0A0B4J237 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-2A0A0B4J237 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-2A0A0B4J237 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.91■□□□□ 0.3
TRAV8-2A0A0B4J237 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-2A0A0B4J237 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-2A0A0B4J237 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRAV8-2A0A0B4J237 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-2A0A0B4J237 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-2A0A0B4J237 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
TRAV8-2A0A0B4J237 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-2A0A0B4J237 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV8-2A0A0B4J237 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-2A0A0B4J237 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-2A0A0B4J237 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TRAV8-2A0A0B4J237 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRAV8-2A0A0B4J237 TERT-206ENST00000508104 2486 ntTSL 5 BASIC16.9■□□□□ 0.3
TRAV8-2A0A0B4J237 AL353803.4-201ENST00000565882 1934 ntBASIC16.9■□□□□ 0.3
TRAV8-2A0A0B4J237 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRAV8-2A0A0B4J237 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-2A0A0B4J237 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV8-2A0A0B4J237 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-2A0A0B4J237 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-2A0A0B4J237 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-2A0A0B4J237 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TRAV8-2A0A0B4J237 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-2A0A0B4J237 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAV8-2A0A0B4J237 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAV8-2A0A0B4J237 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-2A0A0B4J237 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
TRAV8-2A0A0B4J237 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-2A0A0B4J237 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-2A0A0B4J237 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV8-2A0A0B4J237 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 AC021242.3-201ENST00000607598 1377 ntBASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV8-2A0A0B4J237 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV8-2A0A0B4J237 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-2A0A0B4J237 EP400NL-214ENST00000641289 2402 ntBASIC16.86■□□□□ 0.29
TRAV8-2A0A0B4J237 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-2A0A0B4J237 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-2A0A0B4J237 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV8-2A0A0B4J237 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV8-2A0A0B4J237 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-2A0A0B4J237 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC16.86■□□□□ 0.29
TRAV8-2A0A0B4J237 GUSBP5-202ENST00000510805 1989 ntBASIC16.86■□□□□ 0.29
TRAV8-2A0A0B4J237 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV8-2A0A0B4J237 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV8-2A0A0B4J237 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-2A0A0B4J237 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV8-2A0A0B4J237 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms